Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 SPTLC1P1-201ENST00000447199 261 ntBASIC16.5■□□□□ 0.23
SLC6A4P31645 TERF1P3-201ENST00000505638 1227 ntBASIC16.5■□□□□ 0.23
SLC6A4P31645 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC6A4P31645 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A4P31645 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC6A4P31645 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC6A4P31645 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC6A4P31645 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.5■□□□□ 0.23
SLC6A4P31645 AC025048.3-201ENST00000590609 569 ntBASIC16.5■□□□□ 0.23
SLC6A4P31645 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A4P31645 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.5■□□□□ 0.23
SLC6A4P31645 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.5■□□□□ 0.23
SLC6A4P31645 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.5■□□□□ 0.23
SLC6A4P31645 AC005702.4-201ENST00000618393 416 ntBASIC16.5■□□□□ 0.23
SLC6A4P31645 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.5■□□□□ 0.23
SLC6A4P31645 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SLC6A4P31645 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A4P31645 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.5■□□□□ 0.23
SLC6A4P31645 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
SLC6A4P31645 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A4P31645 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A4P31645 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SLC6A4P31645 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.5■□□□□ 0.23
SLC6A4P31645 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SLC6A4P31645 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC6A4P31645 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A4P31645 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC6A4P31645 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
SLC6A4P31645 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A4P31645 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A4P31645 AL035633.1-201ENST00000406139 838 ntBASIC16.49■□□□□ 0.23
SLC6A4P31645 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SLC6A4P31645 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.49■□□□□ 0.23
SLC6A4P31645 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A4P31645 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A4P31645 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A4P31645 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 AC104794.3-201ENST00000566840 1248 ntBASIC16.49■□□□□ 0.23
SLC6A4P31645 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC6A4P31645 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 AC009118.2-201ENST00000613275 655 ntBASIC16.49■□□□□ 0.23
SLC6A4P31645 AC004461.2-201ENST00000629517 803 ntBASIC16.49■□□□□ 0.23
SLC6A4P31645 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
SLC6A4P31645 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.49■□□□□ 0.23
SLC6A4P31645 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A4P31645 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SLC6A4P31645 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.49■□□□□ 0.23
SLC6A4P31645 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SLC6A4P31645 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SLC6A4P31645 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
SLC6A4P31645 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 BTBD7P1-201ENST00000447253 1453 ntBASIC16.48■□□□□ 0.23
SLC6A4P31645 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A4P31645 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A4P31645 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC6A4P31645 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SLC6A4P31645 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A4P31645 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.48■□□□□ 0.23
SLC6A4P31645 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC6A4P31645 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC6A4P31645 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A4P31645 AC114501.2-201ENST00000439631 535 ntBASIC16.48■□□□□ 0.23
SLC6A4P31645 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC6A4P31645 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A4P31645 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A4P31645 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC6A4P31645 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC6A4P31645 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC6A4P31645 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SLC6A4P31645 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC6A4P31645 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms