Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.75■□□□□ 0.11
EPHA3P29320 OR7E14P-202ENST00000530490 1290 ntBASIC15.75■□□□□ 0.11
EPHA3P29320 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.75■□□□□ 0.11
EPHA3P29320 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.75■□□□□ 0.11
EPHA3P29320 ACTL9-202ENST00000612068 1252 ntBASIC15.75■□□□□ 0.11
EPHA3P29320 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
EPHA3P29320 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
EPHA3P29320 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
EPHA3P29320 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.75■□□□□ 0.11
EPHA3P29320 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.75■□□□□ 0.11
EPHA3P29320 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
EPHA3P29320 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.75■□□□□ 0.11
EPHA3P29320 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.75■□□□□ 0.11
EPHA3P29320 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
EPHA3P29320 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
EPHA3P29320 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 AL009178.2-201ENST00000597278 2719 ntBASIC15.74■□□□□ 0.11
EPHA3P29320 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA3P29320 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.74■□□□□ 0.11
EPHA3P29320 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
EPHA3P29320 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA3P29320 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
EPHA3P29320 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.74■□□□□ 0.11
EPHA3P29320 HMGA1P7-201ENST00000406908 502 ntBASIC15.74■□□□□ 0.11
EPHA3P29320 SAPCD2P3-201ENST00000455031 850 ntBASIC15.74■□□□□ 0.11
EPHA3P29320 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
EPHA3P29320 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.74■□□□□ 0.11
EPHA3P29320 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.74■□□□□ 0.11
EPHA3P29320 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA3P29320 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.74■□□□□ 0.11
EPHA3P29320 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA3P29320 AL031055.1-201ENST00000606362 631 ntBASIC15.74■□□□□ 0.11
EPHA3P29320 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.74■□□□□ 0.11
EPHA3P29320 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA3P29320 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA3P29320 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
EPHA3P29320 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.74■□□□□ 0.11
EPHA3P29320 AC092127.1-201ENST00000567093 3455 ntBASIC15.74■□□□□ 0.11
EPHA3P29320 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
EPHA3P29320 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
EPHA3P29320 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.73■□□□□ 0.11
EPHA3P29320 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
EPHA3P29320 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHA3P29320 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.73■□□□□ 0.11
EPHA3P29320 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
EPHA3P29320 AC090616.6-203ENST00000579186 1945 ntBASIC15.73■□□□□ 0.11
EPHA3P29320 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
EPHA3P29320 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHA3P29320 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.73■□□□□ 0.11
EPHA3P29320 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHA3P29320 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.73■□□□□ 0.11
EPHA3P29320 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.73■□□□□ 0.11
EPHA3P29320 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.73■□□□□ 0.11
EPHA3P29320 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 KRT18P35-201ENST00000510488 1269 ntBASIC15.73■□□□□ 0.11
EPHA3P29320 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.73■□□□□ 0.11
EPHA3P29320 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.73■□□□□ 0.11
EPHA3P29320 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
EPHA3P29320 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms