Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RXRBP28702 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RXRBP28702 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RXRBP28702 ISCA2P1-201ENST00000425548 448 ntBASIC20.65■□□□□ 0.9
RXRBP28702 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RXRBP28702 AGPAT5P1-201ENST00000455855 1019 ntBASIC20.65■□□□□ 0.9
RXRBP28702 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC20.65■□□□□ 0.9
RXRBP28702 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC20.65■□□□□ 0.9
RXRBP28702 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC20.65■□□□□ 0.9
RXRBP28702 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC20.65■□□□□ 0.9
RXRBP28702 AL132780.4-201ENST00000624870 1135 ntBASIC20.65■□□□□ 0.9
RXRBP28702 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RXRBP28702 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RXRBP28702 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.65■□□□□ 0.9
RXRBP28702 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.65■□□□□ 0.9
RXRBP28702 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RXRBP28702 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RXRBP28702 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RXRBP28702 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.64■□□□□ 0.9
RXRBP28702 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RXRBP28702 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RXRBP28702 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.64■□□□□ 0.9
RXRBP28702 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RXRBP28702 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RXRBP28702 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RXRBP28702 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.64■□□□□ 0.89
RXRBP28702 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RXRBP28702 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC20.64■□□□□ 0.89
RXRBP28702 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC20.64■□□□□ 0.89
RXRBP28702 AC100850.1-201ENST00000506768 649 ntBASIC20.64■□□□□ 0.89
RXRBP28702 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC20.64■□□□□ 0.89
RXRBP28702 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC20.64■□□□□ 0.89
RXRBP28702 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC20.64■□□□□ 0.89
RXRBP28702 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC20.64■□□□□ 0.89
RXRBP28702 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC20.64■□□□□ 0.89
RXRBP28702 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC20.64■□□□□ 0.89
RXRBP28702 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RXRBP28702 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.64■□□□□ 0.89
RXRBP28702 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RXRBP28702 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.64■□□□□ 0.89
RXRBP28702 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RXRBP28702 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RXRBP28702 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 AL138799.1-201ENST00000448213 1675 ntBASIC20.64■□□□□ 0.89
RXRBP28702 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.64■□□□□ 0.89
RXRBP28702 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RXRBP28702 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.63■□□□□ 0.89
RXRBP28702 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RXRBP28702 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.63■□□□□ 0.89
RXRBP28702 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
RXRBP28702 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.63■□□□□ 0.89
RXRBP28702 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RXRBP28702 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC20.63■□□□□ 0.89
RXRBP28702 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC20.63■□□□□ 0.89
RXRBP28702 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC20.63■□□□□ 0.89
RXRBP28702 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC20.63■□□□□ 0.89
RXRBP28702 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC20.63■□□□□ 0.89
RXRBP28702 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC20.63■□□□□ 0.89
RXRBP28702 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC20.63■□□□□ 0.89
RXRBP28702 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC20.63■□□□□ 0.89
RXRBP28702 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 MIR4754-201ENST00000582477 89 ntBASIC20.63■□□□□ 0.89
RXRBP28702 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.63■□□□□ 0.89
RXRBP28702 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC20.63■□□□□ 0.89
RXRBP28702 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC20.63■□□□□ 0.89
RXRBP28702 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RXRBP28702 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 AC007787.1-201ENST00000588095 1583 ntBASIC20.63■□□□□ 0.89
RXRBP28702 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RXRBP28702 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRBP28702 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RXRBP28702 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRBP28702 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RXRBP28702 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RXRBP28702 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms