Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.33□□□□□ -0.12
CTLA4P16410 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.33□□□□□ -0.12
CTLA4P16410 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.33□□□□□ -0.12
CTLA4P16410 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CTLA4P16410 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
CTLA4P16410 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.33□□□□□ -0.12
CTLA4P16410 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.33□□□□□ -0.12
CTLA4P16410 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CTLA4P16410 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.32□□□□□ -0.12
CTLA4P16410 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.32□□□□□ -0.12
CTLA4P16410 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CTLA4P16410 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CTLA4P16410 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.32□□□□□ -0.12
CTLA4P16410 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CTLA4P16410 MCCD1P2-201ENST00000423228 335 ntBASIC14.32□□□□□ -0.12
CTLA4P16410 AC142381.1-201ENST00000426099 345 ntBASIC14.32□□□□□ -0.12
CTLA4P16410 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.32□□□□□ -0.12
CTLA4P16410 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.32□□□□□ -0.12
CTLA4P16410 RN7SL589P-201ENST00000481268 310 ntBASIC14.32□□□□□ -0.12
CTLA4P16410 POLD2P1-201ENST00000511220 997 ntBASIC14.32□□□□□ -0.12
CTLA4P16410 PGAM5P1-201ENST00000518923 814 ntBASIC14.32□□□□□ -0.12
CTLA4P16410 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 KRT18P58-201ENST00000527480 1120 ntBASIC14.32□□□□□ -0.12
CTLA4P16410 FAM86C2P-203ENST00000528684 1004 ntBASIC14.32□□□□□ -0.12
CTLA4P16410 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.32□□□□□ -0.12
CTLA4P16410 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.32□□□□□ -0.12
CTLA4P16410 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.32□□□□□ -0.12
CTLA4P16410 AC061975.2-201ENST00000581722 295 ntBASIC14.32□□□□□ -0.12
CTLA4P16410 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.32□□□□□ -0.12
CTLA4P16410 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.32□□□□□ -0.12
CTLA4P16410 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CTLA4P16410 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.32□□□□□ -0.12
CTLA4P16410 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CTLA4P16410 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CTLA4P16410 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.31□□□□□ -0.12
CTLA4P16410 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.31□□□□□ -0.12
CTLA4P16410 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTLA4P16410 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.31□□□□□ -0.12
CTLA4P16410 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTLA4P16410 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTLA4P16410 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTLA4P16410 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.31□□□□□ -0.12
CTLA4P16410 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTLA4P16410 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.31□□□□□ -0.12
CTLA4P16410 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTLA4P16410 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.31□□□□□ -0.12
CTLA4P16410 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CTLA4P16410 CICP13-201ENST00000422015 2789 ntBASIC14.31□□□□□ -0.12
CTLA4P16410 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTLA4P16410 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CTLA4P16410 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTLA4P16410 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CTLA4P16410 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTLA4P16410 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CTLA4P16410 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CTLA4P16410 MIR574-201ENST00000385209 96 ntBASIC14.31□□□□□ -0.12
CTLA4P16410 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms