| MUC1 | P15941 | SMN1-201 | ENST00000351205 | 900 nt | APPRIS P3 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | SMN2-201 | ENST00000380741 | 900 nt | APPRIS P4 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | MECP2-203 | ENST00000407218 | 1174 nt | TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | DANCR-201 | ENST00000411630 | 904 nt | TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | AL109741.1-201 | ENST00000432195 | 403 nt | TSL 2 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | TTC31-205 | ENST00000442235 | 958 nt | TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | CFL1-202 | ENST00000524553 | 860 nt | TSL 2 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | SMCO4-204 | ENST00000527149 | 472 nt | APPRIS P1 TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | DCTPP1-203 | ENST00000567983 | 801 nt | TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | AC005829.1-201 | ENST00000570002 | 483 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | ARHGDIA-208 | ENST00000581876 | 709 nt | TSL 3 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | TMEM97-205 | ENST00000583381 | 578 nt | TSL 4 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | SBK3-202 | ENST00000612221 | 1270 nt | APPRIS P1 TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | HOTTIP_1.1-201 | ENST00000620415 | 57 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | SMN2-216 | ENST00000638794 | 846 nt | APPRIS ALT2 TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | GGT3P-204 | ENST00000453783 | 1664 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | CANT1-211 | ENST00000591773 | 1669 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | ACP5-212 | ENST00000592828 | 1699 nt | APPRIS P1 TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | EIF2B4-212 | ENST00000622434 | 1771 nt | TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | PDE8B-204 | ENST00000342343 | 2677 nt | APPRIS ALT2 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | RASA1-201 | ENST00000274376 | 3752 nt | APPRIS P3 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | MOB3B-201 | ENST00000262244 | 6454 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | ITPR3-201 | ENST00000374316 | 9870 nt | APPRIS P1 TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | SLC29A1-205 | ENST00000371740 | 2219 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | CTSB-201 | ENST00000345125 | 2028 nt | APPRIS P1 TSL 5 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | CISH-201 | ENST00000348721 | 2043 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | AC139530.2-201 | ENST00000571730 | 1922 nt | APPRIS P1 TSL 2 BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | SAMM50-201 | ENST00000350028 | 1717 nt | APPRIS P1 TSL 1 (best) BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | GGT4P-201 | ENST00000623672 | 1708 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | LINC01144-201 | ENST00000626198 | 1710 nt | BASIC | 13.9 | □□□□□ -0.18 | | |
| MUC1 | P15941 | AP004609.1-201 | ENST00000498872 | 1646 nt | TSL 1 (best) BASIC | 13.9 | □□□□□ -0.19 | | |
| MUC1 | P15941 | AKAP8P1-201 | ENST00000434743 | 1349 nt | BASIC | 13.9 | □□□□□ -0.19 | | |
| MUC1 | P15941 | ARHGEF1-219 | ENST00000599846 | 3393 nt | APPRIS ALT2 TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | ABLIM2-202 | ENST00000361581 | 2472 nt | APPRIS ALT2 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | HOGA1-202 | ENST00000370646 | 2488 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | PSMA8-202 | ENST00000343848 | 1675 nt | TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | MVK-207 | ENST00000539575 | 2747 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | PDXP-202 | ENST00000403251 | 1571 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | LYPLA1-214 | ENST00000618741 | 2526 nt | TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | CAMKV-204 | ENST00000466940 | 1475 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | IGSF11-209 | ENST00000491903 | 1487 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | FNDC8-201 | ENST00000158009 | 1388 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | SLC3A2-204 | ENST00000377891 | 2222 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | TMEM147-201 | ENST00000222284 | 899 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | MYEF2-201 | ENST00000267836 | 2958 nt | APPRIS ALT2 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | HIST1H2BD-202 | ENST00000377777 | 496 nt | APPRIS P1 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | ALKBH6-202 | ENST00000378875 | 973 nt | APPRIS P3 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | HTR5BP-201 | ENST00000430851 | 1154 nt | BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | AL160408.2-201 | ENST00000436039 | 693 nt | TSL 3 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | CSAD-208 | ENST00000444623 | 2122 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | AL669831.5-202 | ENST00000457084 | 566 nt | TSL 4 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | AC019257.1-202 | ENST00000521498 | 445 nt | TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | LINC01485-205 | ENST00000523617 | 586 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | KRTAP5-9-201 | ENST00000528743 | 1136 nt | APPRIS P1 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | AHSA1-202 | ENST00000535854 | 1173 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | RARRES2P8-201 | ENST00000566335 | 367 nt | BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | AC099811.2-203 | ENST00000592574 | 958 nt | APPRIS P1 TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | SIGLEC7-205 | ENST00000600577 | 616 nt | TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | AL078644.1-201 | ENST00000609881 | 752 nt | BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | CITED2-204 | ENST00000618718 | 901 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | MIEF2-203 | ENST00000395704 | 2879 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | AGTPBP1-201 | ENST00000337006 | 4473 nt | TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | C3orf67-201 | ENST00000295966 | 2650 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | ATP6V0E2-212 | ENST00000611515 | 2565 nt | TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | ASCL1-201 | ENST00000266744 | 2472 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | FERMT3-201 | ENST00000279227 | 2489 nt | APPRIS P4 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | FERMT3-202 | ENST00000345728 | 2481 nt | APPRIS ALT1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | MIER1-205 | ENST00000371014 | 1728 nt | TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | ZNF580-202 | ENST00000543039 | 1707 nt | APPRIS P1 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | AC025165.1-201 | ENST00000356672 | 2355 nt | TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | MAGEF1-201 | ENST00000317897 | 1636 nt | APPRIS P1 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | FADS3-207 | ENST00000527697 | 1640 nt | TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | TBK1-201 | ENST00000331710 | 3256 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | ERG28-201 | ENST00000256319 | 2633 nt | APPRIS P1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | DAB2IP-201 | ENST00000259371 | 5469 nt | APPRIS P4 TSL 5 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | CELF4-202 | ENST00000361795 | 1853 nt | APPRIS ALT1 TSL 2 BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | COL2A1-202 | ENST00000380518 | 5071 nt | APPRIS ALT1 TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | PNRC1-202 | ENST00000354922 | 1345 nt | TSL 1 (best) BASIC | 13.89 | □□□□□ -0.19 | | |
| MUC1 | P15941 | DUOXA2-201 | ENST00000323030 | 1760 nt | APPRIS P1 TSL 1 (best) BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | EIPR1-202 | ENST00000398659 | 1795 nt | TSL 5 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | LETM2-201 | ENST00000297720 | 1693 nt | TSL 2 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | TGIF1-205 | ENST00000401449 | 1670 nt | TSL 2 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | PHKA1-202 | ENST00000373539 | 4476 nt | TSL 5 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | TBC1D2-201 | ENST00000342112 | 3046 nt | TSL 2 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | NR2C1-219 | ENST00000622476 | 1561 nt | TSL 5 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | KCND3-202 | ENST00000315987 | 2716 nt | APPRIS P4 TSL 1 (best) BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | EWSR1-201 | ENST00000331029 | 2267 nt | TSL 5 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | CHMP1A-202 | ENST00000535997 | 2295 nt | TSL 2 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | GPM6A-210 | ENST00000506894 | 2614 nt | TSL 1 (best) BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | COL26A1-203 | ENST00000613501 | 2970 nt | APPRIS ALT2 TSL 1 (best) BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | ARID5A-201 | ENST00000357485 | 2188 nt | APPRIS P1 TSL 1 (best) BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | PRR22-202 | ENST00000419421 | 1392 nt | APPRIS P1 TSL 2 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | LIMS2-205 | ENST00000409455 | 2500 nt | APPRIS ALT1 TSL 1 (best) BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | LINC01136-203 | ENST00000457348 | 2539 nt | TSL 2 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | FIGLA-201 | ENST00000332372 | 722 nt | APPRIS P1 TSL 1 (best) BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | TCEAL3-203 | ENST00000372628 | 1221 nt | APPRIS P1 TSL 5 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | COA5-202 | ENST00000409997 | 557 nt | TSL 4 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | RPP21-221 | ENST00000428040 | 594 nt | TSL 2 BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | RPP21-224 | ENST00000442966 | 525 nt | APPRIS P1 TSL 1 (best) BASIC | 13.88 | □□□□□ -0.19 | | |
| MUC1 | P15941 | RN7SL589P-201 | ENST00000481268 | 310 nt | BASIC | 13.88 | □□□□□ -0.19 | | |