Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DOBP13765 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DOBP13765 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 HAUS4P1-201ENST00000406739 1145 ntBASIC14.49□□□□□ -0.09
HLA-DOBP13765 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 AC069335.1-201ENST00000489972 472 ntBASIC14.49□□□□□ -0.09
HLA-DOBP13765 YBX1P5-201ENST00000509441 847 ntBASIC14.49□□□□□ -0.09
HLA-DOBP13765 IGHV3-62-201ENST00000520057 340 ntBASIC14.49□□□□□ -0.09
HLA-DOBP13765 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 AC022145.2-201ENST00000598203 171 ntBASIC14.49□□□□□ -0.09
HLA-DOBP13765 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 UXT-AS1-201ENST00000590504 1525 ntBASIC14.49□□□□□ -0.09
HLA-DOBP13765 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DOBP13765 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DOBP13765 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 UPF3AP3-201ENST00000420996 769 ntBASIC14.48□□□□□ -0.09
HLA-DOBP13765 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 SLC25A39P2-201ENST00000537614 270 ntBASIC14.48□□□□□ -0.09
HLA-DOBP13765 AC092865.5-201ENST00000545435 363 ntBASIC14.48□□□□□ -0.09
HLA-DOBP13765 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 AC061975.2-201ENST00000581722 295 ntBASIC14.48□□□□□ -0.09
HLA-DOBP13765 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DOBP13765 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HLA-DOBP13765 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms