Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.26■□□□□ 0.19
THRAP10827 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.26■□□□□ 0.19
THRAP10827 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
THRAP10827 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.26■□□□□ 0.19
THRAP10827 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.25■□□□□ 0.19
THRAP10827 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
THRAP10827 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
THRAP10827 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
THRAP10827 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.25■□□□□ 0.19
THRAP10827 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
THRAP10827 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 DBET-201ENST00000630918 3363 ntBASIC16.25■□□□□ 0.19
THRAP10827 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
THRAP10827 AC010491.1-201ENST00000563101 2797 ntBASIC16.25■□□□□ 0.19
THRAP10827 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.25■□□□□ 0.19
THRAP10827 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.25■□□□□ 0.19
THRAP10827 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
THRAP10827 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 HMGA1P7-201ENST00000406908 502 ntBASIC16.25■□□□□ 0.19
THRAP10827 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.25■□□□□ 0.19
THRAP10827 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.25■□□□□ 0.19
THRAP10827 SPDYE11-202ENST00000450699 704 ntBASIC16.25■□□□□ 0.19
THRAP10827 RN7SL589P-201ENST00000481268 310 ntBASIC16.25■□□□□ 0.19
THRAP10827 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.25■□□□□ 0.19
THRAP10827 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.25■□□□□ 0.19
THRAP10827 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
THRAP10827 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.25■□□□□ 0.19
THRAP10827 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
THRAP10827 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.25■□□□□ 0.19
THRAP10827 SPDYE9P-201ENST00000570642 692 ntBASIC16.25■□□□□ 0.19
THRAP10827 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.25■□□□□ 0.19
THRAP10827 LINC02084-201ENST00000606069 1096 ntBASIC16.25■□□□□ 0.19
THRAP10827 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.25■□□□□ 0.19
THRAP10827 SPDYE10P-202ENST00000612005 668 ntBASIC16.25■□□□□ 0.19
THRAP10827 SPDYE8P-202ENST00000612377 668 ntBASIC16.25■□□□□ 0.19
THRAP10827 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 LINC00628-201ENST00000628516 1289 ntBASIC16.25■□□□□ 0.19
THRAP10827 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
THRAP10827 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
THRAP10827 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.25■□□□□ 0.19
THRAP10827 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.25■□□□□ 0.19
THRAP10827 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
THRAP10827 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
THRAP10827 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.24■□□□□ 0.19
THRAP10827 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
THRAP10827 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
THRAP10827 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
THRAP10827 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
THRAP10827 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
THRAP10827 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
THRAP10827 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
THRAP10827 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.24■□□□□ 0.19
THRAP10827 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
THRAP10827 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
THRAP10827 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.24■□□□□ 0.19
THRAP10827 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
THRAP10827 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
THRAP10827 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
THRAP10827 MIR770-201ENST00000390219 98 ntBASIC16.24■□□□□ 0.19
THRAP10827 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.24■□□□□ 0.19
THRAP10827 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
THRAP10827 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.24■□□□□ 0.19
THRAP10827 KRT8P48-201ENST00000515599 1220 ntBASIC16.24■□□□□ 0.19
THRAP10827 AC109322.1-201ENST00000524499 1264 ntBASIC16.24■□□□□ 0.19
THRAP10827 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
THRAP10827 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
THRAP10827 AC093520.2-201ENST00000561830 333 ntBASIC16.24■□□□□ 0.19
THRAP10827 AC025678.2-201ENST00000562061 970 ntBASIC16.24■□□□□ 0.19
THRAP10827 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.24■□□□□ 0.19
THRAP10827 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.24■□□□□ 0.19
THRAP10827 AC013467.2-201ENST00000605472 835 ntBASIC16.24■□□□□ 0.19
THRAP10827 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
THRAP10827 AC009093.7-201ENST00000623853 1223 ntBASIC16.24■□□□□ 0.19
THRAP10827 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
THRAP10827 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
THRAP10827 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
THRAP10827 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
THRAP10827 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms