Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 AL512652.2-201ENST00000625156 1716 ntBASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 MTND2P7-201ENST00000521337 640 ntBASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 AC091951.1-201ENST00000512854 2465 ntBASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 AC092919.2-201ENST00000623631 1645 ntBASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 PCGF3-213ENST00000620529 1899 ntBASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2AFB1P0C5Y9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 ABHD17AP1-201ENST00000358206 933 ntBASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 AC128688.1-201ENST00000487626 519 ntBASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2AFB1P0C5Y9 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms