Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLTAP09496 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLTAP09496 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.68■□□□□ 0.42
CLTAP09496 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.68■□□□□ 0.42
CLTAP09496 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLTAP09496 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CLTAP09496 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLTAP09496 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CLTAP09496 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.68■□□□□ 0.42
CLTAP09496 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.68■□□□□ 0.42
CLTAP09496 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.68■□□□□ 0.42
CLTAP09496 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.68■□□□□ 0.42
CLTAP09496 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.68■□□□□ 0.42
CLTAP09496 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.68■□□□□ 0.42
CLTAP09496 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.68■□□□□ 0.42
CLTAP09496 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.68■□□□□ 0.42
CLTAP09496 NFIC-211ENST00000641145 8399 ntBASIC17.68■□□□□ 0.42
CLTAP09496 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CLTAP09496 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.68■□□□□ 0.42
CLTAP09496 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.68■□□□□ 0.42
CLTAP09496 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CLTAP09496 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLTAP09496 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.68■□□□□ 0.42
CLTAP09496 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLTAP09496 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.67■□□□□ 0.42
CLTAP09496 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.67■□□□□ 0.42
CLTAP09496 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.67■□□□□ 0.42
CLTAP09496 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.67■□□□□ 0.42
CLTAP09496 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.67■□□□□ 0.42
CLTAP09496 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.67■□□□□ 0.42
CLTAP09496 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.67■□□□□ 0.42
CLTAP09496 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.67■□□□□ 0.42
CLTAP09496 MIR4321-201ENST00000592276 80 ntBASIC17.67■□□□□ 0.42
CLTAP09496 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.67■□□□□ 0.42
CLTAP09496 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.67■□□□□ 0.42
CLTAP09496 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.67■□□□□ 0.42
CLTAP09496 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.67■□□□□ 0.42
CLTAP09496 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.67■□□□□ 0.42
CLTAP09496 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.67■□□□□ 0.42
CLTAP09496 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.67■□□□□ 0.42
CLTAP09496 REXO1L8P-201ENST00000604378 1897 ntBASIC17.67■□□□□ 0.42
CLTAP09496 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLTAP09496 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.66■□□□□ 0.42
CLTAP09496 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.66■□□□□ 0.42
CLTAP09496 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLTAP09496 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.66■□□□□ 0.42
CLTAP09496 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CLTAP09496 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLTAP09496 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 MIR943-201ENST00000401286 94 ntBASIC17.66■□□□□ 0.42
CLTAP09496 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.66■□□□□ 0.42
CLTAP09496 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.66■□□□□ 0.42
CLTAP09496 AC069120.2-201ENST00000524091 540 ntBASIC17.66■□□□□ 0.42
CLTAP09496 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
CLTAP09496 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 AC105021.1-202ENST00000570572 669 ntBASIC17.66■□□□□ 0.42
CLTAP09496 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.66■□□□□ 0.42
CLTAP09496 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLTAP09496 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms