Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.39□□□□□ -0.11
ERCC1P07992 AC131009.4-201ENST00000624048 1740 ntBASIC14.39□□□□□ -0.11
ERCC1P07992 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC1P07992 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.39□□□□□ -0.11
ERCC1P07992 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC1P07992 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC1P07992 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC1P07992 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.39□□□□□ -0.11
ERCC1P07992 AP000344.2-201ENST00000512987 629 ntBASIC14.39□□□□□ -0.11
ERCC1P07992 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.39□□□□□ -0.11
ERCC1P07992 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC1P07992 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC1P07992 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.39□□□□□ -0.11
ERCC1P07992 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC1P07992 MIR4515-201ENST00000584082 81 ntBASIC14.39□□□□□ -0.11
ERCC1P07992 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC1P07992 ACTL9-202ENST00000612068 1252 ntBASIC14.39□□□□□ -0.11
ERCC1P07992 REXO1L3P-201ENST00000622202 1288 ntBASIC14.39□□□□□ -0.11
ERCC1P07992 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.39□□□□□ -0.11
ERCC1P07992 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 PCGF3-213ENST00000620529 1899 ntBASIC14.39□□□□□ -0.11
ERCC1P07992 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ERCC1P07992 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 SNX33P1-201ENST00000592116 1762 ntBASIC14.39□□□□□ -0.11
ERCC1P07992 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.39□□□□□ -0.11
ERCC1P07992 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.39□□□□□ -0.11
ERCC1P07992 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
ERCC1P07992 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ERCC1P07992 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.39□□□□□ -0.11
ERCC1P07992 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ERCC1P07992 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ERCC1P07992 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.38□□□□□ -0.11
ERCC1P07992 AL353732.1-201ENST00000569618 1459 ntBASIC14.38□□□□□ -0.11
ERCC1P07992 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC1P07992 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
ERCC1P07992 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.38□□□□□ -0.11
ERCC1P07992 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC1P07992 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.38□□□□□ -0.11
ERCC1P07992 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 AC012569.1-201ENST00000591191 1524 ntBASIC14.38□□□□□ -0.11
ERCC1P07992 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ERCC1P07992 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.38□□□□□ -0.11
ERCC1P07992 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.38□□□□□ -0.11
ERCC1P07992 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.38□□□□□ -0.11
ERCC1P07992 AC004835.2-201ENST00000603762 682 ntBASIC14.38□□□□□ -0.11
ERCC1P07992 AL161645.1-201ENST00000622716 1255 ntBASIC14.38□□□□□ -0.11
ERCC1P07992 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ERCC1P07992 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
ERCC1P07992 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ERCC1P07992 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 AC092850.2-201ENST00000623821 2697 ntBASIC14.38□□□□□ -0.11
ERCC1P07992 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ERCC1P07992 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC1P07992 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC1P07992 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC1P07992 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ERCC1P07992 GPAA1P2-202ENST00000606848 1787 ntBASIC14.37□□□□□ -0.11
ERCC1P07992 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC1P07992 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.37□□□□□ -0.11
ERCC1P07992 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC1P07992 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.37□□□□□ -0.11
ERCC1P07992 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.37□□□□□ -0.11
ERCC1P07992 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC1P07992 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC1P07992 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.37□□□□□ -0.11
ERCC1P07992 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ERCC1P07992 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms