Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
GGPS1O95749 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.05■□□□□ 0.48
GGPS1O95749 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.05■□□□□ 0.48
GGPS1O95749 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.05■□□□□ 0.48
GGPS1O95749 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.05■□□□□ 0.48
GGPS1O95749 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.05■□□□□ 0.48
GGPS1O95749 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.05■□□□□ 0.48
GGPS1O95749 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GGPS1O95749 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
GGPS1O95749 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 ME2P1-201ENST00000426028 1970 ntBASIC18.04■□□□□ 0.48
GGPS1O95749 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
GGPS1O95749 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GGPS1O95749 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
GGPS1O95749 AC018695.7-201ENST00000624587 2492 ntBASIC18.04■□□□□ 0.48
GGPS1O95749 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
GGPS1O95749 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.04■□□□□ 0.48
GGPS1O95749 AC098614.1-201ENST00000368528 745 ntBASIC18.04■□□□□ 0.48
GGPS1O95749 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.04■□□□□ 0.48
GGPS1O95749 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 AC004987.2-201ENST00000395959 1148 ntBASIC18.04■□□□□ 0.48
GGPS1O95749 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
GGPS1O95749 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.04■□□□□ 0.48
GGPS1O95749 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.04■□□□□ 0.48
GGPS1O95749 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.04■□□□□ 0.48
GGPS1O95749 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.04■□□□□ 0.48
GGPS1O95749 AC243562.2-201ENST00000561247 970 ntBASIC18.04■□□□□ 0.48
GGPS1O95749 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.04■□□□□ 0.48
GGPS1O95749 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
GGPS1O95749 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.04■□□□□ 0.48
GGPS1O95749 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
GGPS1O95749 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.04■□□□□ 0.48
GGPS1O95749 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
GGPS1O95749 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.04■□□□□ 0.48
GGPS1O95749 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
GGPS1O95749 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.04■□□□□ 0.48
GGPS1O95749 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
GGPS1O95749 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
GGPS1O95749 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
GGPS1O95749 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.03■□□□□ 0.48
GGPS1O95749 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.03■□□□□ 0.48
GGPS1O95749 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.03■□□□□ 0.48
GGPS1O95749 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.03■□□□□ 0.48
GGPS1O95749 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GGPS1O95749 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.03■□□□□ 0.48
GGPS1O95749 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.03■□□□□ 0.48
GGPS1O95749 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.03■□□□□ 0.48
GGPS1O95749 AC092337.1-201ENST00000568699 1129 ntBASIC18.03■□□□□ 0.48
GGPS1O95749 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.03■□□□□ 0.48
GGPS1O95749 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
GGPS1O95749 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
GGPS1O95749 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
GGPS1O95749 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.03■□□□□ 0.48
GGPS1O95749 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GGPS1O95749 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.03■□□□□ 0.48
GGPS1O95749 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.02■□□□□ 0.48
GGPS1O95749 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GGPS1O95749 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
GGPS1O95749 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
GGPS1O95749 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.02■□□□□ 0.48
GGPS1O95749 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
GGPS1O95749 DOC2GP-204ENST00000639052 2548 ntBASIC18.02■□□□□ 0.48
GGPS1O95749 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.02■□□□□ 0.48
GGPS1O95749 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GGPS1O95749 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
GGPS1O95749 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.02■□□□□ 0.48
GGPS1O95749 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.02■□□□□ 0.48
GGPS1O95749 AZGP1P1-201ENST00000411909 902 ntBASIC18.02■□□□□ 0.48
GGPS1O95749 AP006294.1-201ENST00000415407 339 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms