Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.54□□□□□ -0.08
UBL3O95164 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.53□□□□□ -0.08
UBL3O95164 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
UBL3O95164 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.53□□□□□ -0.08
UBL3O95164 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.53□□□□□ -0.08
UBL3O95164 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 AL512652.2-201ENST00000625156 1716 ntBASIC14.53□□□□□ -0.08
UBL3O95164 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
UBL3O95164 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.53□□□□□ -0.08
UBL3O95164 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.53□□□□□ -0.08
UBL3O95164 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.53□□□□□ -0.08
UBL3O95164 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
UBL3O95164 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
UBL3O95164 AP002472.1-201ENST00000577490 586 ntBASIC14.53□□□□□ -0.08
UBL3O95164 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
UBL3O95164 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.53□□□□□ -0.08
UBL3O95164 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.53□□□□□ -0.08
UBL3O95164 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.53□□□□□ -0.08
UBL3O95164 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.53□□□□□ -0.08
UBL3O95164 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.53□□□□□ -0.08
UBL3O95164 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.53□□□□□ -0.08
UBL3O95164 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
UBL3O95164 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBL3O95164 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBL3O95164 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBL3O95164 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
UBL3O95164 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBL3O95164 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBL3O95164 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBL3O95164 AC092919.2-201ENST00000623631 1645 ntBASIC14.52□□□□□ -0.08
UBL3O95164 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
UBL3O95164 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
UBL3O95164 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.52□□□□□ -0.08
UBL3O95164 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBL3O95164 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.52□□□□□ -0.08
UBL3O95164 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBL3O95164 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBL3O95164 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBL3O95164 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBL3O95164 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.52□□□□□ -0.08
UBL3O95164 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBL3O95164 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBL3O95164 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
UBL3O95164 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.52□□□□□ -0.09
UBL3O95164 YBX2P1-201ENST00000394192 760 ntBASIC14.52□□□□□ -0.09
UBL3O95164 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.52□□□□□ -0.09
UBL3O95164 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.52□□□□□ -0.09
UBL3O95164 BX842568.4-201ENST00000421222 227 ntBASIC14.52□□□□□ -0.09
UBL3O95164 AC092474.2-201ENST00000424288 719 ntBASIC14.52□□□□□ -0.09
UBL3O95164 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 MIR3687-2-201ENST00000577708 61 ntBASIC14.52□□□□□ -0.09
UBL3O95164 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.52□□□□□ -0.09
UBL3O95164 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 MIR3687-1-201ENST00000614492 61 ntBASIC14.52□□□□□ -0.09
UBL3O95164 AC091812.2-201ENST00000619081 385 ntBASIC14.52□□□□□ -0.09
UBL3O95164 C20orf181-201ENST00000623918 480 ntBASIC14.52□□□□□ -0.09
UBL3O95164 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
UBL3O95164 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.52□□□□□ -0.09
UBL3O95164 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.52□□□□□ -0.09
UBL3O95164 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.52□□□□□ -0.09
UBL3O95164 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
UBL3O95164 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.52□□□□□ -0.09
UBL3O95164 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.52□□□□□ -0.09
UBL3O95164 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBL3O95164 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.52□□□□□ -0.09
UBL3O95164 GGT3P-204ENST00000453783 1664 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms