Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.95■□□□□ 0.46
CLSTN1O94985 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.95■□□□□ 0.46
CLSTN1O94985 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 DNAJB3-201ENST00000446806 729 ntBASIC17.95■□□□□ 0.46
CLSTN1O94985 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.95■□□□□ 0.46
CLSTN1O94985 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.95■□□□□ 0.46
CLSTN1O94985 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
CLSTN1O94985 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.95■□□□□ 0.46
CLSTN1O94985 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.95■□□□□ 0.46
CLSTN1O94985 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.95■□□□□ 0.46
CLSTN1O94985 AC091812.2-201ENST00000619081 385 ntBASIC17.95■□□□□ 0.46
CLSTN1O94985 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.95■□□□□ 0.46
CLSTN1O94985 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLSTN1O94985 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 KRT8P39-201ENST00000396270 1433 ntBASIC17.95■□□□□ 0.46
CLSTN1O94985 AC005052.1-201ENST00000625181 2492 ntBASIC17.95■□□□□ 0.46
CLSTN1O94985 HYMAI-201ENST00000635591 3347 ntBASIC17.95■□□□□ 0.46
CLSTN1O94985 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.95■□□□□ 0.46
CLSTN1O94985 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CLSTN1O94985 AC008894.3-201ENST00000624324 3103 ntBASIC17.94■□□□□ 0.46
CLSTN1O94985 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.94■□□□□ 0.46
CLSTN1O94985 AL365203.3-201ENST00000609742 2057 ntBASIC17.94■□□□□ 0.46
CLSTN1O94985 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.94■□□□□ 0.46
CLSTN1O94985 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CLSTN1O94985 AC002056.1-201ENST00000395613 760 ntBASIC17.94■□□□□ 0.46
CLSTN1O94985 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.94■□□□□ 0.46
CLSTN1O94985 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.94■□□□□ 0.46
CLSTN1O94985 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.94■□□□□ 0.46
CLSTN1O94985 PGAM5P1-201ENST00000518923 814 ntBASIC17.94■□□□□ 0.46
CLSTN1O94985 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLSTN1O94985 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.94■□□□□ 0.46
CLSTN1O94985 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.94■□□□□ 0.46
CLSTN1O94985 MTHFR-217ENST00000641820 1569 ntBASIC17.94■□□□□ 0.46
CLSTN1O94985 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 CTBP1-AS2-206ENST00000581398 5652 ntBASIC17.94■□□□□ 0.46
CLSTN1O94985 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CLSTN1O94985 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.94■□□□□ 0.46
CLSTN1O94985 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.94■□□□□ 0.46
CLSTN1O94985 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.94■□□□□ 0.46
CLSTN1O94985 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLSTN1O94985 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 ALOX12P2-203ENST00000570921 1945 ntBASIC17.94■□□□□ 0.46
CLSTN1O94985 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLSTN1O94985 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLSTN1O94985 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CLSTN1O94985 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.93■□□□□ 0.46
CLSTN1O94985 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLSTN1O94985 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CLSTN1O94985 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 YBX2P1-201ENST00000394192 760 ntBASIC17.93■□□□□ 0.46
CLSTN1O94985 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.93■□□□□ 0.46
CLSTN1O94985 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLSTN1O94985 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.93■□□□□ 0.46
CLSTN1O94985 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 MTDHP5-201ENST00000598980 586 ntBASIC17.93■□□□□ 0.46
CLSTN1O94985 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.93■□□□□ 0.46
CLSTN1O94985 AC021097.1-201ENST00000607902 574 ntBASIC17.93■□□□□ 0.46
CLSTN1O94985 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLSTN1O94985 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CLSTN1O94985 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms