Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AL603832.2-201ENST00000566195 2125 ntBASIC12.66□□□□□ -0.38
ZNF253O75346 NKAPP1-205ENST00000585790 367 ntBASIC12.66□□□□□ -0.38
ZNF253O75346 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.66□□□□□ -0.38
ZNF253O75346 AC064862.7-201ENST00000604520 867 ntBASIC12.66□□□□□ -0.38
ZNF253O75346 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF253O75346 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF253O75346 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF253O75346 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 AL359258.3-201ENST00000622910 2331 ntBASIC12.66□□□□□ -0.38
ZNF253O75346 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF253O75346 GPAA1P2-202ENST00000606848 1787 ntBASIC12.66□□□□□ -0.38
ZNF253O75346 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.66□□□□□ -0.38
ZNF253O75346 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZNF253O75346 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.66□□□□□ -0.38
ZNF253O75346 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
ZNF253O75346 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 AC026748.1-201ENST00000624349 3251 ntBASIC12.65□□□□□ -0.38
ZNF253O75346 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF253O75346 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF253O75346 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.65□□□□□ -0.38
ZNF253O75346 AC023157.3-201ENST00000619086 2088 ntBASIC12.65□□□□□ -0.38
ZNF253O75346 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
ZNF253O75346 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF253O75346 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF253O75346 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.65□□□□□ -0.38
ZNF253O75346 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF253O75346 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.65□□□□□ -0.38
ZNF253O75346 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF253O75346 AC020765.3-201ENST00000613051 740 ntBASIC12.65□□□□□ -0.38
ZNF253O75346 AC004706.3-202ENST00000621574 984 ntBASIC12.65□□□□□ -0.38
ZNF253O75346 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF253O75346 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
ZNF253O75346 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ZNF253O75346 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ZNF253O75346 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.65□□□□□ -0.38
ZNF253O75346 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF253O75346 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ZNF253O75346 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.65□□□□□ -0.38
ZNF253O75346 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ZNF253O75346 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ZNF253O75346 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZNF253O75346 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZNF253O75346 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.65□□□□□ -0.39
ZNF253O75346 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZNF253O75346 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ZNF253O75346 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
ZNF253O75346 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.65□□□□□ -0.39
ZNF253O75346 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.65□□□□□ -0.39
ZNF253O75346 PTENP1-202ENST00000532280 3996 ntBASIC12.64□□□□□ -0.39
ZNF253O75346 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF253O75346 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
ZNF253O75346 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF253O75346 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.64□□□□□ -0.39
ZNF253O75346 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF253O75346 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF253O75346 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF253O75346 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF253O75346 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF253O75346 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF253O75346 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZNF253O75346 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ZNF253O75346 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF253O75346 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF253O75346 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.64□□□□□ -0.39
ZNF253O75346 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
ZNF253O75346 AC091076.1-201ENST00000610741 619 ntBASIC12.64□□□□□ -0.39
ZNF253O75346 AL805961.1-202ENST00000641562 540 ntBASIC12.64□□□□□ -0.39
ZNF253O75346 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF253O75346 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ZNF253O75346 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF253O75346 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ZNF253O75346 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ZNF253O75346 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms