Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.57□□□□□ -0.4
PDE6DO43924 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 AC011477.6-201ENST00000604980 1927 ntBASIC12.56□□□□□ -0.4
PDE6DO43924 AL122018.1-201ENST00000446607 2310 ntBASIC12.56□□□□□ -0.4
PDE6DO43924 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.56□□□□□ -0.4
PDE6DO43924 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.56□□□□□ -0.4
PDE6DO43924 AC005912.2-201ENST00000619492 2400 ntBASIC12.56□□□□□ -0.4
PDE6DO43924 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
PDE6DO43924 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.56□□□□□ -0.4
PDE6DO43924 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 TSPY7P-201ENST00000431358 1114 ntBASIC12.56□□□□□ -0.4
PDE6DO43924 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.56□□□□□ -0.4
PDE6DO43924 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.56□□□□□ -0.4
PDE6DO43924 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.56□□□□□ -0.4
PDE6DO43924 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.56□□□□□ -0.4
PDE6DO43924 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.56□□□□□ -0.4
PDE6DO43924 RNF126P1-202ENST00000569893 925 ntBASIC12.56□□□□□ -0.4
PDE6DO43924 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.56□□□□□ -0.4
PDE6DO43924 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.56□□□□□ -0.4
PDE6DO43924 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.56□□□□□ -0.4
PDE6DO43924 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
PDE6DO43924 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.56□□□□□ -0.4
PDE6DO43924 AL592071.1-201ENST00000611956 408 ntBASIC12.56□□□□□ -0.4
PDE6DO43924 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.56□□□□□ -0.4
PDE6DO43924 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
PDE6DO43924 AC124864.1-201ENST00000623408 392 ntBASIC12.56□□□□□ -0.4
PDE6DO43924 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.56□□□□□ -0.4
PDE6DO43924 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.56□□□□□ -0.4
PDE6DO43924 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
PDE6DO43924 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.56□□□□□ -0.4
PDE6DO43924 AC004817.3-201ENST00000602957 2129 ntBASIC12.56□□□□□ -0.4
PDE6DO43924 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 AL590787.1-201ENST00000568856 1315 ntBASIC12.56□□□□□ -0.4
PDE6DO43924 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.56□□□□□ -0.4
PDE6DO43924 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
PDE6DO43924 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
PDE6DO43924 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
PDE6DO43924 AC091951.1-201ENST00000512854 2465 ntBASIC12.55□□□□□ -0.4
PDE6DO43924 FGD5P1-202ENST00000614866 2498 ntBASIC12.55□□□□□ -0.4
PDE6DO43924 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.55□□□□□ -0.4
PDE6DO43924 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.55□□□□□ -0.4
PDE6DO43924 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.55□□□□□ -0.4
PDE6DO43924 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.55□□□□□ -0.4
PDE6DO43924 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.55□□□□□ -0.4
PDE6DO43924 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.55□□□□□ -0.4
PDE6DO43924 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.55□□□□□ -0.4
PDE6DO43924 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 MMP23A-201ENST00000234610 1017 ntBASIC12.55□□□□□ -0.4
PDE6DO43924 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
PDE6DO43924 HAUS4P1-201ENST00000406739 1145 ntBASIC12.55□□□□□ -0.4
PDE6DO43924 SPDYE21P-201ENST00000413323 827 ntBASIC12.55□□□□□ -0.4
PDE6DO43924 CD70-202ENST00000423145 881 ntTSL 2 BASIC12.55□□□□□ -0.4
PDE6DO43924 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.55□□□□□ -0.4
PDE6DO43924 FAM201B-201ENST00000458407 597 ntBASIC12.55□□□□□ -0.4
PDE6DO43924 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.55□□□□□ -0.4
PDE6DO43924 AC090192.1-201ENST00000517740 490 ntBASIC12.55□□□□□ -0.4
PDE6DO43924 CD99P1-205ENST00000527459 561 ntBASIC12.55□□□□□ -0.4
PDE6DO43924 AL441883.1-201ENST00000566170 1045 ntBASIC12.55□□□□□ -0.4
PDE6DO43924 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC12.55□□□□□ -0.4
PDE6DO43924 MIR4651-201ENST00000582622 73 ntBASIC12.55□□□□□ -0.4
PDE6DO43924 CYP2A7P1-201ENST00000595391 815 ntBASIC12.55□□□□□ -0.4
PDE6DO43924 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
PDE6DO43924 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.55□□□□□ -0.4
PDE6DO43924 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.55□□□□□ -0.4
PDE6DO43924 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms