Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.74■□□□□ 0.11
HDAC3O15379 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.74■□□□□ 0.11
HDAC3O15379 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
HDAC3O15379 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.74■□□□□ 0.11
HDAC3O15379 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.74■□□□□ 0.11
HDAC3O15379 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.74■□□□□ 0.11
HDAC3O15379 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.74■□□□□ 0.11
HDAC3O15379 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.74■□□□□ 0.11
HDAC3O15379 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.74■□□□□ 0.11
HDAC3O15379 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 AF238378.1-201ENST00000526806 358 ntBASIC15.74■□□□□ 0.11
HDAC3O15379 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.74■□□□□ 0.11
HDAC3O15379 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HDAC3O15379 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.74■□□□□ 0.11
HDAC3O15379 AL645728.2-201ENST00000641974 660 ntBASIC15.74■□□□□ 0.11
HDAC3O15379 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.74■□□□□ 0.11
HDAC3O15379 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.74■□□□□ 0.11
HDAC3O15379 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.74■□□□□ 0.11
HDAC3O15379 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HDAC3O15379 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.74■□□□□ 0.11
HDAC3O15379 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.74■□□□□ 0.11
HDAC3O15379 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.73■□□□□ 0.11
HDAC3O15379 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.73■□□□□ 0.11
HDAC3O15379 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 AP001282.1-201ENST00000531301 1499 ntBASIC15.73■□□□□ 0.11
HDAC3O15379 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.73■□□□□ 0.11
HDAC3O15379 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.73■□□□□ 0.11
HDAC3O15379 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.73■□□□□ 0.11
HDAC3O15379 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.73■□□□□ 0.11
HDAC3O15379 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.73■□□□□ 0.11
HDAC3O15379 AL031432.2-201ENST00000566714 459 ntBASIC15.73■□□□□ 0.11
HDAC3O15379 AL928711.1-201ENST00000570165 459 ntBASIC15.73■□□□□ 0.11
HDAC3O15379 AL356488.2-201ENST00000602755 427 ntBASIC15.73■□□□□ 0.11
HDAC3O15379 AC008735.5-201ENST00000623544 497 ntBASIC15.73■□□□□ 0.11
HDAC3O15379 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.73■□□□□ 0.11
HDAC3O15379 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
HDAC3O15379 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
HDAC3O15379 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HDAC3O15379 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.73■□□□□ 0.11
HDAC3O15379 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HDAC3O15379 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.73■□□□□ 0.11
HDAC3O15379 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HDAC3O15379 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HDAC3O15379 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HDAC3O15379 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.72■□□□□ 0.11
HDAC3O15379 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HDAC3O15379 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HDAC3O15379 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.72■□□□□ 0.11
HDAC3O15379 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HDAC3O15379 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HDAC3O15379 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HDAC3O15379 TCAF2P1-201ENST00000291129 2421 ntBASIC15.72■□□□□ 0.11
HDAC3O15379 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.72■□□□□ 0.11
HDAC3O15379 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.72■□□□□ 0.11
HDAC3O15379 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HDAC3O15379 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HDAC3O15379 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HDAC3O15379 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
HDAC3O15379 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.72■□□□□ 0.11
HDAC3O15379 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HDAC3O15379 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HDAC3O15379 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.72■□□□□ 0.11
HDAC3O15379 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HDAC3O15379 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.72■□□□□ 0.11
HDAC3O15379 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.72■□□□□ 0.11
HDAC3O15379 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.72■□□□□ 0.11
HDAC3O15379 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms