Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC27■■□□□ 1.91
CUX2O14529 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
CUX2O14529 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC27■■□□□ 1.91
CUX2O14529 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
CUX2O14529 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CUX2O14529 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC27■■□□□ 1.91
CUX2O14529 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC27■■□□□ 1.91
CUX2O14529 PDIA3P2-201ENST00000428073 158 ntBASIC27■■□□□ 1.91
CUX2O14529 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC27■■□□□ 1.91
CUX2O14529 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC27■■□□□ 1.91
CUX2O14529 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC27■■□□□ 1.91
CUX2O14529 AL353637.1-201ENST00000451571 732 ntBASIC27■■□□□ 1.91
CUX2O14529 AC012158.2-201ENST00000536546 354 ntBASIC27■■□□□ 1.91
CUX2O14529 FTLP5-201ENST00000586853 534 ntBASIC27■■□□□ 1.91
CUX2O14529 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CUX2O14529 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC26.99■■□□□ 1.91
CUX2O14529 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
CUX2O14529 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC26.99■■□□□ 1.91
CUX2O14529 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CUX2O14529 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CUX2O14529 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
CUX2O14529 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC26.99■■□□□ 1.91
CUX2O14529 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CUX2O14529 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CUX2O14529 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CUX2O14529 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
CUX2O14529 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CUX2O14529 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CUX2O14529 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CUX2O14529 TARDBPP1-201ENST00000442013 1203 ntBASIC26.99■■□□□ 1.91
CUX2O14529 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CUX2O14529 RNF41-210ENST00000552244 716 ntTSL 3 BASIC26.99■■□□□ 1.91
CUX2O14529 MIR4649-201ENST00000582839 64 ntBASIC26.99■■□□□ 1.91
CUX2O14529 AC020922.3-201ENST00000595064 547 ntBASIC26.99■■□□□ 1.91
CUX2O14529 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CUX2O14529 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CUX2O14529 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC26.99■■□□□ 1.91
CUX2O14529 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CUX2O14529 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CUX2O14529 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CUX2O14529 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CUX2O14529 AC006335.1-201ENST00000445200 547 ntBASIC26.98■■□□□ 1.91
CUX2O14529 AL118516.1-201ENST00000564152 670 ntBASIC26.98■■□□□ 1.91
CUX2O14529 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC26.98■■□□□ 1.91
CUX2O14529 AC018695.6-201ENST00000614011 534 ntBASIC26.98■■□□□ 1.91
CUX2O14529 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CUX2O14529 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
CUX2O14529 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CUX2O14529 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CUX2O14529 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
CUX2O14529 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
CUX2O14529 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
CUX2O14529 GRN-214ENST00000589265 1632 ntTSL 5 BASIC26.97■■□□□ 1.91
CUX2O14529 PP12613-201ENST00000424958 2230 ntBASIC26.97■■□□□ 1.91
CUX2O14529 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CUX2O14529 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC26.97■■□□□ 1.91
CUX2O14529 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CUX2O14529 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CUX2O14529 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CUX2O14529 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CUX2O14529 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CUX2O14529 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC26.97■■□□□ 1.91
CUX2O14529 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
CUX2O14529 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC26.97■■□□□ 1.91
CUX2O14529 MIR4321-201ENST00000592276 80 ntBASIC26.97■■□□□ 1.91
CUX2O14529 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
CUX2O14529 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
CUX2O14529 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC26.97■■□□□ 1.91
CUX2O14529 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC26.97■■□□□ 1.91
CUX2O14529 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CUX2O14529 AL354989.2-201ENST00000435838 1540 ntBASIC26.96■■□□□ 1.91
CUX2O14529 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC26.96■■□□□ 1.91
CUX2O14529 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CUX2O14529 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CUX2O14529 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CUX2O14529 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
CUX2O14529 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
CUX2O14529 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC26.96■■□□□ 1.91
CUX2O14529 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CUX2O14529 SYT17-208ENST00000568433 812 ntTSL 3 BASIC26.96■■□□□ 1.91
CUX2O14529 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC26.96■■□□□ 1.91
CUX2O14529 PAM16-215ENST00000577031 548 ntTSL 4 BASIC26.96■■□□□ 1.91
CUX2O14529 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC26.96■■□□□ 1.91
CUX2O14529 ECM1P1-201ENST00000604092 1279 ntBASIC26.96■■□□□ 1.91
CUX2O14529 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC26.96■■□□□ 1.91
CUX2O14529 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CUX2O14529 TP73-209ENST00000603362 1668 ntTSL 5 BASIC26.96■■□□□ 1.91
CUX2O14529 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CUX2O14529 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CUX2O14529 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
CUX2O14529 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CUX2O14529 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
CUX2O14529 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CUX2O14529 KRT18P64-201ENST00000434946 1219 ntBASIC26.95■■□□□ 1.91
CUX2O14529 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC26.95■■□□□ 1.91
CUX2O14529 KRT18P25-201ENST00000508931 1278 ntBASIC26.95■■□□□ 1.91
CUX2O14529 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC26.95■■□□□ 1.91
CUX2O14529 AC093813.1-201ENST00000605066 256 ntBASIC26.95■■□□□ 1.91
CUX2O14529 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
CUX2O14529 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC26.95■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms