Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AC131902.2-201ENST00000566892 2172 ntBASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AP002982.1-201ENST00000492365 877 ntBASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 C1QBPP2-201ENST00000528754 825 ntBASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.12□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 FAM201B-201ENST00000458407 597 ntBASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AC106818.1-201ENST00000623223 3242 ntBASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AC079776.2-201ENST00000641154 1609 ntBASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BOLA2-SMG1P6H3BVE0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms