Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 AC026748.1-201ENST00000624349 3251 ntBASIC16.78■□□□□ 0.28
SRRM3A6NNA2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 FAM58CP-201ENST00000435741 640 ntBASIC16.78■□□□□ 0.28
SRRM3A6NNA2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 RN7SL204P-201ENST00000582831 262 ntBASIC16.78■□□□□ 0.28
SRRM3A6NNA2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 LINC00628-201ENST00000628516 1289 ntBASIC16.78■□□□□ 0.28
SRRM3A6NNA2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRRM3A6NNA2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 AC004461.1-201ENST00000412461 403 ntBASIC16.77■□□□□ 0.28
SRRM3A6NNA2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SRRM3A6NNA2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRRM3A6NNA2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRRM3A6NNA2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
SRRM3A6NNA2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SRRM3A6NNA2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms