Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 TREML5P-201ENST00000421694 576 ntBASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 AC055876.3-201ENST00000431496 288 ntBASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 AC138649.4-201ENST00000612222 287 ntBASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPDC1A2A3K4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 FO538757.1-201ENST00000623083 1397 ntBASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 AC142381.1-201ENST00000426099 345 ntBASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 IGHV3-42-201ENST00000520410 361 ntBASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 AC140878.1-201ENST00000565277 250 ntBASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPDC1A2A3K4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 AP005117.1-202ENST00000581724 1908 ntBASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 RNA5SP421-201ENST00000516864 134 ntBASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 MIR4453-201ENST00000584019 89 ntBASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPDC1A2A3K4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms