Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.34■□□□□ 0.21
RAI2Q9Y5P3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAI2Q9Y5P3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.33■□□□□ 0.21
RAI2Q9Y5P3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
RAI2Q9Y5P3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
RAI2Q9Y5P3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
RAI2Q9Y5P3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAI2Q9Y5P3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAI2Q9Y5P3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAI2Q9Y5P3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
RAI2Q9Y5P3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 BASP1P1-201ENST00000430708 665 ntBASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 UGT1A2P-201ENST00000454886 866 ntBASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 AC067863.1-201ENST00000494933 530 ntBASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 AL391005.1-201ENST00000623953 2435 ntBASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAI2Q9Y5P3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 AL513523.2-202ENST00000427283 2040 ntBASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 CNN2P2-201ENST00000443536 909 ntBASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 CNN2P3-201ENST00000450201 906 ntBASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.32■□□□□ 0.2
RAI2Q9Y5P3 AC015911.4-201ENST00000588022 1070 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms