Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAPPC4Q9Y296 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 CICP13-201ENST00000422015 2789 ntBASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 AC091812.2-201ENST00000619081 385 ntBASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAPPC4Q9Y296 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 YBX2P1-201ENST00000394192 760 ntBASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAPPC4Q9Y296 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAPPC4Q9Y296 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms