Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 AC006449.5-201ENST00000610658 2098 ntBASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 AL589702.1-201ENST00000641229 1509 ntBASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 AC098614.1-201ENST00000368528 745 ntBASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 SERBP1P3-201ENST00000459980 809 ntBASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 AC044860.1-202ENST00000559481 777 ntBASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TM9SF3Q9HD45 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.14■□□□□ 0.18
TM9SF3Q9HD45 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TM9SF3Q9HD45 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 SPDYE19P-201ENST00000338590 713 ntBASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 DGCR5-201ENST00000399539 862 ntBASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 AC087499.6-201ENST00000411576 835 ntBASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 DOC2GP-202ENST00000514950 1163 ntBASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 AC061975.2-201ENST00000581722 295 ntBASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 AC026979.3-201ENST00000607315 403 ntBASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.14■□□□□ 0.17
TM9SF3Q9HD45 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 AL391825.1-201ENST00000457671 1364 ntBASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 U91328.1-201ENST00000437528 223 ntBASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 ATP5G2P4-201ENST00000442175 420 ntBASIC16.13■□□□□ 0.17
TM9SF3Q9HD45 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms