Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 Z97205.2-201ENST00000564697 1639 ntBASIC17.35■□□□□ 0.37
NXF3Q9H4D5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
NXF3Q9H4D5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 NME2P1-201ENST00000426182 414 ntBASIC17.34■□□□□ 0.37
NXF3Q9H4D5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 AP001282.1-201ENST00000531301 1499 ntBASIC17.34■□□□□ 0.37
NXF3Q9H4D5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
NXF3Q9H4D5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.33■□□□□ 0.37
NXF3Q9H4D5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 AC087499.6-201ENST00000411576 835 ntBASIC17.33■□□□□ 0.36
NXF3Q9H4D5 AC074338.1-201ENST00000416825 156 ntBASIC17.33■□□□□ 0.36
NXF3Q9H4D5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NXF3Q9H4D5 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 PRORSD1P-202ENST00000563365 2154 ntBASIC17.32■□□□□ 0.36
NXF3Q9H4D5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NXF3Q9H4D5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms