Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 KRT18P27-201ENST00000427733 1299 ntBASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 HMGN1P19-201ENST00000436976 333 ntBASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 AC002347.1-201ENST00000569543 541 ntBASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 MIR1199-201ENST00000621445 119 ntBASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 SNX33P1-201ENST00000592116 1762 ntBASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM55Q9BYV6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 AC073621.1-201ENST00000392730 636 ntBASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 AC064836.3-201ENST00000607928 673 ntBASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 AC073592.4-201ENST00000623827 446 ntBASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRIM55Q9BYV6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.39■□□□□ 0.22
TRIM55Q9BYV6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
TRIM55Q9BYV6 AC023157.3-201ENST00000619086 2088 ntBASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 AC027796.2-201ENST00000575326 344 ntBASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 AC006557.2-201ENST00000592985 1240 ntBASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 AL355385.1-201ENST00000606123 409 ntBASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 AC005593.1-201ENST00000624894 515 ntBASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM55Q9BYV6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms