Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.36□□□□□ -0.11
VRK1Q99986 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.36□□□□□ -0.11
VRK1Q99986 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.36□□□□□ -0.11
VRK1Q99986 SPDYE10P-202ENST00000612005 668 ntBASIC14.36□□□□□ -0.11
VRK1Q99986 SPDYE8P-202ENST00000612377 668 ntBASIC14.36□□□□□ -0.11
VRK1Q99986 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VRK1Q99986 AC092053.1-201ENST00000605787 1936 ntBASIC14.36□□□□□ -0.11
VRK1Q99986 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VRK1Q99986 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VRK1Q99986 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.36□□□□□ -0.11
VRK1Q99986 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VRK1Q99986 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VRK1Q99986 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.36□□□□□ -0.11
VRK1Q99986 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.36□□□□□ -0.11
VRK1Q99986 AL353732.1-201ENST00000569618 1459 ntBASIC14.36□□□□□ -0.11
VRK1Q99986 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VRK1Q99986 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VRK1Q99986 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
VRK1Q99986 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.36□□□□□ -0.11
VRK1Q99986 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VRK1Q99986 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VRK1Q99986 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VRK1Q99986 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VRK1Q99986 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VRK1Q99986 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.35□□□□□ -0.11
VRK1Q99986 AC126177.1-201ENST00000547829 2218 ntBASIC14.35□□□□□ -0.11
VRK1Q99986 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 AL021920.2-201ENST00000624828 1351 ntBASIC14.35□□□□□ -0.11
VRK1Q99986 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
VRK1Q99986 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.35□□□□□ -0.11
VRK1Q99986 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.35□□□□□ -0.11
VRK1Q99986 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.35□□□□□ -0.11
VRK1Q99986 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.35□□□□□ -0.11
VRK1Q99986 FAM86C2P-203ENST00000528684 1004 ntBASIC14.35□□□□□ -0.11
VRK1Q99986 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.35□□□□□ -0.11
VRK1Q99986 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VRK1Q99986 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.35□□□□□ -0.11
VRK1Q99986 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.35□□□□□ -0.11
VRK1Q99986 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.35□□□□□ -0.11
VRK1Q99986 AC105339.1-204ENST00000636249 355 ntBASIC14.35□□□□□ -0.11
VRK1Q99986 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
VRK1Q99986 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.35□□□□□ -0.11
VRK1Q99986 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VRK1Q99986 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.35□□□□□ -0.11
VRK1Q99986 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.35□□□□□ -0.11
VRK1Q99986 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VRK1Q99986 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.34□□□□□ -0.11
VRK1Q99986 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
VRK1Q99986 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VRK1Q99986 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
VRK1Q99986 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VRK1Q99986 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.34□□□□□ -0.11
VRK1Q99986 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.34□□□□□ -0.11
VRK1Q99986 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.34□□□□□ -0.11
VRK1Q99986 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.34□□□□□ -0.11
VRK1Q99986 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.34□□□□□ -0.11
VRK1Q99986 HMGA1P7-201ENST00000406908 502 ntBASIC14.34□□□□□ -0.11
VRK1Q99986 AC004461.1-201ENST00000412461 403 ntBASIC14.34□□□□□ -0.11
VRK1Q99986 TSEN15P1-201ENST00000423257 515 ntBASIC14.34□□□□□ -0.11
VRK1Q99986 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.34□□□□□ -0.11
VRK1Q99986 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.34□□□□□ -0.11
VRK1Q99986 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.34□□□□□ -0.11
VRK1Q99986 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.34□□□□□ -0.11
VRK1Q99986 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 AL355385.1-201ENST00000606123 409 ntBASIC14.34□□□□□ -0.11
VRK1Q99986 AC026120.1-201ENST00000611536 926 ntBASIC14.34□□□□□ -0.11
VRK1Q99986 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.34□□□□□ -0.11
VRK1Q99986 AP001350.2-201ENST00000625104 1094 ntBASIC14.34□□□□□ -0.11
VRK1Q99986 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.34□□□□□ -0.11
VRK1Q99986 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VRK1Q99986 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VRK1Q99986 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VRK1Q99986 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms