Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 NME6-211ENST00000447314 621 ntTSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AP005019.2-201ENST00000615104 511 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 LINC01815-202ENST00000641468 1409 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 NME4-203ENST00000397722 1232 ntTSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 THAP4-203ENST00000402545 833 ntTSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 NDUFAB1P1-201ENST00000404262 460 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AP003171.2-201ENST00000528208 925 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 KRT8P4-201ENST00000509735 1454 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AL627422.1-201ENST00000434104 580 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 MIR3677-201ENST00000578964 60 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AP005264.6-204ENST00000588436 719 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC092612.1-201ENST00000514501 998 ntBASIC4.76□□□□□ -1.65
HMCN1Q96RW7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC4.76□□□□□ -1.65
HMCN1Q96RW7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMCN1Q96RW7 REXO1L9P-201ENST00000604264 2108 ntBASIC4.75□□□□□ -1.65
HMCN1Q96RW7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HMCN1Q96RW7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMCN1Q96RW7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMCN1Q96RW7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMCN1Q96RW7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms