Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 SPDYE14P-201ENST00000442619 822 ntBASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 RNA5SP421-201ENST00000516864 134 ntBASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 ALOX12P2-203ENST00000570921 1945 ntBASIC16.06■□□□□ 0.16
SH3KBP1Q96B97 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 AC107890.1-201ENST00000422478 521 ntBASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 AL138918.1-201ENST00000568306 659 ntBASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 AC051619.7-201ENST00000568314 623 ntBASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 MIR6080-201ENST00000617359 66 ntBASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SH3KBP1Q96B97 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 AC125807.1-201ENST00000483097 614 ntBASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 AC140878.1-201ENST00000565277 250 ntBASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 AC092364.2-202ENST00000597012 1073 ntBASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 AC008741.2-201ENST00000612792 3115 ntBASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.04■□□□□ 0.16
SH3KBP1Q96B97 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms