Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC006058.4-201ENST00000624016 1670 ntBASIC14.55□□□□□ -0.08
PTP4A1Q93096 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 TNRC18P2-201ENST00000417666 2714 ntBASIC14.55□□□□□ -0.08
PTP4A1Q93096 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 AL590627.1-203ENST00000421194 1026 ntBASIC14.55□□□□□ -0.08
PTP4A1Q93096 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 RPL13AP23-201ENST00000480739 586 ntBASIC14.55□□□□□ -0.08
PTP4A1Q93096 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 BX640515.1-201ENST00000617215 977 ntBASIC14.55□□□□□ -0.08
PTP4A1Q93096 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 IL9RP2-201ENST00000423948 1312 ntBASIC14.55□□□□□ -0.08
PTP4A1Q93096 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.55□□□□□ -0.08
PTP4A1Q93096 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PTP4A1Q93096 AC023157.3-201ENST00000619086 2088 ntBASIC14.54□□□□□ -0.08
PTP4A1Q93096 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 VN2R19P-201ENST00000442399 1052 ntBASIC14.54□□□□□ -0.08
PTP4A1Q93096 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 AC145285.3-201ENST00000564603 959 ntBASIC14.54□□□□□ -0.08
PTP4A1Q93096 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 MIR4751-201ENST00000578027 74 ntBASIC14.54□□□□□ -0.08
PTP4A1Q93096 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 Z83851.2-201ENST00000609564 659 ntBASIC14.54□□□□□ -0.08
PTP4A1Q93096 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PTP4A1Q93096 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PTP4A1Q93096 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PTP4A1Q93096 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.53□□□□□ -0.08
PTP4A1Q93096 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms