Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.19■□□□□ 0.34
SHC3Q92529 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.19■□□□□ 0.34
SHC3Q92529 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHC3Q92529 REXO1L1P-202ENST00000608646 1974 ntBASIC17.19■□□□□ 0.34
SHC3Q92529 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.18■□□□□ 0.34
SHC3Q92529 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.18■□□□□ 0.34
SHC3Q92529 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 AP003680.1-201ENST00000598970 3660 ntBASIC17.18■□□□□ 0.34
SHC3Q92529 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.18■□□□□ 0.34
SHC3Q92529 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.18■□□□□ 0.34
SHC3Q92529 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.18■□□□□ 0.34
SHC3Q92529 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.18■□□□□ 0.34
SHC3Q92529 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.18■□□□□ 0.34
SHC3Q92529 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.18■□□□□ 0.34
SHC3Q92529 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
SHC3Q92529 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.18■□□□□ 0.34
SHC3Q92529 BANF1P1-201ENST00000553684 263 ntBASIC17.18■□□□□ 0.34
SHC3Q92529 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SHC3Q92529 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.18■□□□□ 0.34
SHC3Q92529 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SHC3Q92529 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SHC3Q92529 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.18■□□□□ 0.34
SHC3Q92529 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SHC3Q92529 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.18■□□□□ 0.34
SHC3Q92529 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHC3Q92529 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.18■□□□□ 0.34
SHC3Q92529 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.17■□□□□ 0.34
SHC3Q92529 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.17■□□□□ 0.34
SHC3Q92529 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.17■□□□□ 0.34
SHC3Q92529 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SHC3Q92529 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
SHC3Q92529 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SHC3Q92529 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SHC3Q92529 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.17■□□□□ 0.34
SHC3Q92529 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 AC211486.1-202ENST00000416371 468 ntBASIC17.17■□□□□ 0.34
SHC3Q92529 SPDYE14P-201ENST00000442619 822 ntBASIC17.17■□□□□ 0.34
SHC3Q92529 AC211476.1-201ENST00000503899 468 ntBASIC17.17■□□□□ 0.34
SHC3Q92529 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 AC092865.5-201ENST00000545435 363 ntBASIC17.17■□□□□ 0.34
SHC3Q92529 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.17■□□□□ 0.34
SHC3Q92529 AC026979.3-201ENST00000607315 403 ntBASIC17.17■□□□□ 0.34
SHC3Q92529 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.17■□□□□ 0.34
SHC3Q92529 AC018892.3-201ENST00000623986 2499 ntBASIC17.17■□□□□ 0.34
SHC3Q92529 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHC3Q92529 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SHC3Q92529 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.17■□□□□ 0.34
SHC3Q92529 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SHC3Q92529 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SHC3Q92529 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC3Q92529 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC3Q92529 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC3Q92529 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SHC3Q92529 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC3Q92529 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SHC3Q92529 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC3Q92529 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHC3Q92529 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.16■□□□□ 0.34
SHC3Q92529 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.16■□□□□ 0.34
SHC3Q92529 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC3Q92529 AP006288.1-201ENST00000446065 395 ntBASIC17.16■□□□□ 0.34
SHC3Q92529 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SHC3Q92529 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SHC3Q92529 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.16■□□□□ 0.34
SHC3Q92529 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.16■□□□□ 0.34
SHC3Q92529 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.16■□□□□ 0.34
SHC3Q92529 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.16■□□□□ 0.34
SHC3Q92529 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.16■□□□□ 0.34
SHC3Q92529 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.16■□□□□ 0.34
SHC3Q92529 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SHC3Q92529 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SHC3Q92529 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC3Q92529 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC3Q92529 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.16■□□□□ 0.34
SHC3Q92529 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHC3Q92529 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms