Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 SLED1-202ENST00000512051 380 ntBASIC16.15■□□□□ 0.18
CHD5Q8TDI0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 AC135586.1-201ENST00000539323 574 ntBASIC16.15■□□□□ 0.18
CHD5Q8TDI0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 AC138761.1-201ENST00000584393 385 ntBASIC16.15■□□□□ 0.18
CHD5Q8TDI0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 AC092364.2-202ENST00000597012 1073 ntBASIC16.15■□□□□ 0.18
CHD5Q8TDI0 LINC02084-201ENST00000606069 1096 ntBASIC16.15■□□□□ 0.18
CHD5Q8TDI0 AL158212.4-201ENST00000624062 1286 ntBASIC16.15■□□□□ 0.18
CHD5Q8TDI0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 SPTLC1P1-201ENST00000447199 261 ntBASIC16.15■□□□□ 0.18
CHD5Q8TDI0 COX20P2-201ENST00000452636 358 ntBASIC16.15■□□□□ 0.18
CHD5Q8TDI0 TPRX2P-201ENST00000535362 881 ntBASIC16.15■□□□□ 0.18
CHD5Q8TDI0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 AC015910.1-201ENST00000579400 975 ntBASIC16.15■□□□□ 0.18
CHD5Q8TDI0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 AL391825.1-201ENST00000457671 1364 ntBASIC16.14■□□□□ 0.18
CHD5Q8TDI0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CHD5Q8TDI0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CHD5Q8TDI0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 API5-211ENST00000534695 560 ntTSL 5 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 SPDYE22P-201ENST00000582158 798 ntBASIC16.14■□□□□ 0.17
CHD5Q8TDI0 MIR3197-201ENST00000582241 73 ntBASIC16.14■□□□□ 0.17
CHD5Q8TDI0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD5Q8TDI0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 AC023310.3-201ENST00000557027 670 ntBASIC16.13■□□□□ 0.17
CHD5Q8TDI0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 AC100756.1-201ENST00000562736 682 ntBASIC16.13■□□□□ 0.17
CHD5Q8TDI0 AC138749.3-201ENST00000567691 622 ntBASIC16.13■□□□□ 0.17
CHD5Q8TDI0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.13■□□□□ 0.17
CHD5Q8TDI0 AC116165.1-201ENST00000611806 668 ntBASIC16.13■□□□□ 0.17
CHD5Q8TDI0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms