Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 TERF1P3-201ENST00000505638 1227 ntBASIC17.32■□□□□ 0.36
BEST2Q8NFU1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 AC010336.2-201ENST00000564226 506 ntBASIC17.32■□□□□ 0.36
BEST2Q8NFU1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 AL662844.4-201ENST00000606367 2838 ntBASIC17.32■□□□□ 0.36
BEST2Q8NFU1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST2Q8NFU1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 ZNF890P-202ENST00000530367 1156 ntBASIC17.31■□□□□ 0.36
BEST2Q8NFU1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.31■□□□□ 0.36
BEST2Q8NFU1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST2Q8NFU1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 KRT8P37-201ENST00000451609 1420 ntBASIC17.3■□□□□ 0.36
BEST2Q8NFU1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 AL596087.1-201ENST00000400979 1969 ntBASIC17.3■□□□□ 0.36
BEST2Q8NFU1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BEST2Q8NFU1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms