Protein–RNA interactions for Protein: Q717R9

CYS1, Cystin-1, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYS1Q717R9 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CYS1Q717R9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CYS1Q717R9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CYS1Q717R9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.08■□□□□ 0.17
CYS1Q717R9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
CYS1Q717R9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CYS1Q717R9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CYS1Q717R9 DBET-201ENST00000630918 3363 ntBASIC16.08■□□□□ 0.17
CYS1Q717R9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 REXO1L1P-202ENST00000608646 1974 ntBASIC16.08■□□□□ 0.16
CYS1Q717R9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.08■□□□□ 0.16
CYS1Q717R9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.08■□□□□ 0.16
CYS1Q717R9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.08■□□□□ 0.16
CYS1Q717R9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.08■□□□□ 0.16
CYS1Q717R9 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.08■□□□□ 0.16
CYS1Q717R9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.08■□□□□ 0.16
CYS1Q717R9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.08■□□□□ 0.16
CYS1Q717R9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CYS1Q717R9 AC023824.1-201ENST00000562945 2975 ntBASIC16.08■□□□□ 0.16
CYS1Q717R9 RARRES2P8-201ENST00000566335 367 ntBASIC16.08■□□□□ 0.16
CYS1Q717R9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 AC099522.2-201ENST00000607001 744 ntBASIC16.08■□□□□ 0.16
CYS1Q717R9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.08■□□□□ 0.16
CYS1Q717R9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CYS1Q717R9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CYS1Q717R9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CYS1Q717R9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.08■□□□□ 0.16
CYS1Q717R9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CYS1Q717R9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.08■□□□□ 0.16
CYS1Q717R9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CYS1Q717R9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
CYS1Q717R9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.07■□□□□ 0.16
CYS1Q717R9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.07■□□□□ 0.16
CYS1Q717R9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
CYS1Q717R9 AC092127.1-201ENST00000567093 3455 ntBASIC16.07■□□□□ 0.16
CYS1Q717R9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CYS1Q717R9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CYS1Q717R9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.07■□□□□ 0.16
CYS1Q717R9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CYS1Q717R9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.07■□□□□ 0.16
CYS1Q717R9 RPS8P6-201ENST00000426177 609 ntBASIC16.07■□□□□ 0.16
CYS1Q717R9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.07■□□□□ 0.16
CYS1Q717R9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CYS1Q717R9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CYS1Q717R9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CYS1Q717R9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.07■□□□□ 0.16
CYS1Q717R9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.07■□□□□ 0.16
CYS1Q717R9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 AC018845.2-201ENST00000568326 409 ntBASIC16.07■□□□□ 0.16
CYS1Q717R9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.07■□□□□ 0.16
CYS1Q717R9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.07■□□□□ 0.16
CYS1Q717R9 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.07■□□□□ 0.16
CYS1Q717R9 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 AC008267.7-201ENST00000624570 1194 ntBASIC16.07■□□□□ 0.16
CYS1Q717R9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CYS1Q717R9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.07■□□□□ 0.16
CYS1Q717R9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CYS1Q717R9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.07■□□□□ 0.16
CYS1Q717R9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.07■□□□□ 0.16
CYS1Q717R9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.07■□□□□ 0.16
CYS1Q717R9 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.07■□□□□ 0.16
CYS1Q717R9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.07■□□□□ 0.16
CYS1Q717R9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.07■□□□□ 0.16
CYS1Q717R9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CYS1Q717R9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYS1Q717R9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.06■□□□□ 0.16
CYS1Q717R9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CYS1Q717R9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms