Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 CICP23-201ENST00000605013 2741 ntBASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 AC079776.2-201ENST00000641154 1609 ntBASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 AC211486.1-202ENST00000416371 468 ntBASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 DNAJB3-202ENST00000449667 1266 ntBASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 AC211476.1-201ENST00000503899 468 ntBASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 AC006557.2-201ENST00000592985 1240 ntBASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 MTDHP5-201ENST00000598980 586 ntBASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 AC005912.2-201ENST00000619492 2400 ntBASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 LINC00552-201ENST00000625151 2579 ntBASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 AL109954.1-202ENST00000564051 2148 ntBASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXR1Q6PIV2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 AC004832.2-201ENST00000426397 482 ntBASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 AC107918.4-201ENST00000641966 3141 ntBASIC16.92■□□□□ 0.3
FOXR1Q6PIV2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms