Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 AC243960.2-201ENST00000600996 747 ntBASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.71■□□□□ 0.11
LYSMD4Q5XG99 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LYSMD4Q5XG99 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.71■□□□□ 0.1
LYSMD4Q5XG99 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LYSMD4Q5XG99 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LYSMD4Q5XG99 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 AC134312.5-201ENST00000568031 1313 ntBASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 VDAC1P7-201ENST00000462417 847 ntBASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 SLED1-202ENST00000512051 380 ntBASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LYSMD4Q5XG99 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 AL592424.1-201ENST00000563624 1536 ntBASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 AC012441.1-201ENST00000446669 685 ntBASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 AP001063.1-201ENST00000568332 529 ntBASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 CLUHP6-201ENST00000580789 941 ntBASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 BNIP3P1-202ENST00000550043 1585 ntBASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 AC007613.1-201ENST00000572811 2597 ntBASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LYSMD4Q5XG99 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LYSMD4Q5XG99 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms