Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 AC091304.2-201ENST00000564639 760 ntBASIC15.65■□□□□ 0.1
RNF220Q5VTB9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 AC064862.7-201ENST00000604520 867 ntBASIC15.65■□□□□ 0.1
RNF220Q5VTB9 AC008608.2-201ENST00000606089 416 ntBASIC15.65■□□□□ 0.1
RNF220Q5VTB9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF220Q5VTB9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 AL365209.1-201ENST00000624418 6473 ntBASIC15.64■□□□□ 0.09
RNF220Q5VTB9 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 KRT8P49-201ENST00000604166 1432 ntBASIC15.64■□□□□ 0.09
RNF220Q5VTB9 AC068587.6-202ENST00000641839 5619 ntBASIC15.64■□□□□ 0.09
RNF220Q5VTB9 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF220Q5VTB9 AL122018.1-201ENST00000446607 2310 ntBASIC15.63■□□□□ 0.09
RNF220Q5VTB9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RNF220Q5VTB9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms