Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RN7SL774P-201ENST00000577467 290 ntBASIC13.78□□□□□ -0.2
LRRK2Q5S007 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 AC092053.1-201ENST00000605787 1936 ntBASIC13.78□□□□□ -0.2
LRRK2Q5S007 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 AC087289.5-201ENST00000586076 3175 ntBASIC13.78□□□□□ -0.2
LRRK2Q5S007 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 TUBBP5-203ENST00000508529 1334 ntBASIC13.78□□□□□ -0.2
LRRK2Q5S007 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LRRK2Q5S007 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 DNM1P30-201ENST00000563586 452 ntBASIC13.78□□□□□ -0.2
LRRK2Q5S007 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.78□□□□□ -0.2
LRRK2Q5S007 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.78□□□□□ -0.2
LRRK2Q5S007 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.77□□□□□ -0.2
LRRK2Q5S007 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRK2Q5S007 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.77□□□□□ -0.2
LRRK2Q5S007 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRK2Q5S007 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRK2Q5S007 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LRRK2Q5S007 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRK2Q5S007 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.77□□□□□ -0.2
LRRK2Q5S007 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRK2Q5S007 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LRRK2Q5S007 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 AL139008.1-201ENST00000437894 228 ntBASIC13.77□□□□□ -0.21
LRRK2Q5S007 Z97180.1-201ENST00000445173 988 ntBASIC13.77□□□□□ -0.21
LRRK2Q5S007 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRK2Q5S007 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRK2Q5S007 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRK2Q5S007 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRK2Q5S007 AC107373.2-201ENST00000607735 490 ntBASIC13.77□□□□□ -0.21
LRRK2Q5S007 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LRRK2Q5S007 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
LRRK2Q5S007 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRK2Q5S007 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRK2Q5S007 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRK2Q5S007 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRK2Q5S007 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.77□□□□□ -0.21
LRRK2Q5S007 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRRK2Q5S007 AC000095.1-201ENST00000603208 874 ntBASIC13.77□□□□□ -0.21
LRRK2Q5S007 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.77□□□□□ -0.21
LRRK2Q5S007 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.77□□□□□ -0.21
LRRK2Q5S007 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 AL121723.1-201ENST00000445194 1519 ntBASIC13.76□□□□□ -0.21
LRRK2Q5S007 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRRK2Q5S007 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.76□□□□□ -0.21
LRRK2Q5S007 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms