Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.79■□□□□ 0.6
CERKLQ49MI3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 HAUS4P1-201ENST00000406739 1145 ntBASIC18.78■□□□□ 0.6
CERKLQ49MI3 TARDBPP1-201ENST00000442013 1203 ntBASIC18.78■□□□□ 0.6
CERKLQ49MI3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 AL008721.1-201ENST00000609964 604 ntBASIC18.78■□□□□ 0.6
CERKLQ49MI3 MIR8072-201ENST00000614241 80 ntBASIC18.78■□□□□ 0.6
CERKLQ49MI3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CERKLQ49MI3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.78■□□□□ 0.6
CERKLQ49MI3 AP001282.1-201ENST00000531301 1499 ntBASIC18.77■□□□□ 0.6
CERKLQ49MI3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CERKLQ49MI3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 AC134407.2-201ENST00000625089 1978 ntBASIC18.77■□□□□ 0.6
CERKLQ49MI3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CERKLQ49MI3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CERKLQ49MI3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CERKLQ49MI3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CERKLQ49MI3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CERKLQ49MI3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CERKLQ49MI3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 RPL13P2-201ENST00000440687 659 ntBASIC18.77■□□□□ 0.6
CERKLQ49MI3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 TMEM261P1-201ENST00000604899 340 ntBASIC18.77■□□□□ 0.6
CERKLQ49MI3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CERKLQ49MI3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CERKLQ49MI3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CERKLQ49MI3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.77■□□□□ 0.59
CERKLQ49MI3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CERKLQ49MI3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 AC074338.1-201ENST00000416825 156 ntBASIC18.76■□□□□ 0.59
CERKLQ49MI3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 RN7SL837P-201ENST00000463010 287 ntBASIC18.76■□□□□ 0.59
CERKLQ49MI3 AC104596.2-201ENST00000512793 793 ntBASIC18.76■□□□□ 0.59
CERKLQ49MI3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 CLK3P2-201ENST00000427566 1453 ntBASIC18.76■□□□□ 0.59
CERKLQ49MI3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.76■□□□□ 0.59
CERKLQ49MI3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CERKLQ49MI3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms