Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC20.74■□□□□ 0.91
VPS72Q15906 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC20.74■□□□□ 0.91
VPS72Q15906 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC20.74■□□□□ 0.91
VPS72Q15906 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
VPS72Q15906 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC20.74■□□□□ 0.91
VPS72Q15906 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
VPS72Q15906 AF254983.2-201ENST00000612331 135 ntBASIC20.74■□□□□ 0.91
VPS72Q15906 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS72Q15906 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VPS72Q15906 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VPS72Q15906 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.74■□□□□ 0.91
VPS72Q15906 AL138799.1-201ENST00000448213 1675 ntBASIC20.73■□□□□ 0.91
VPS72Q15906 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.73■□□□□ 0.91
VPS72Q15906 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS72Q15906 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS72Q15906 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS72Q15906 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS72Q15906 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS72Q15906 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS72Q15906 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS72Q15906 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
VPS72Q15906 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS72Q15906 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS72Q15906 NDUFAB1P1-201ENST00000404262 460 ntBASIC20.73■□□□□ 0.91
VPS72Q15906 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS72Q15906 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS72Q15906 LY6E-208ENST00000520531 490 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS72Q15906 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS72Q15906 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC20.73■□□□□ 0.91
VPS72Q15906 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS72Q15906 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.73■□□□□ 0.91
VPS72Q15906 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS72Q15906 BX539320.1-201ENST00000623759 877 ntBASIC20.73■□□□□ 0.91
VPS72Q15906 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
VPS72Q15906 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS72Q15906 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS72Q15906 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VPS72Q15906 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS72Q15906 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.73■□□□□ 0.91
VPS72Q15906 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS72Q15906 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.73■□□□□ 0.91
VPS72Q15906 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VPS72Q15906 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.73■□□□□ 0.91
VPS72Q15906 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
VPS72Q15906 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VPS72Q15906 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VPS72Q15906 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS72Q15906 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.72■□□□□ 0.91
VPS72Q15906 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS72Q15906 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC20.72■□□□□ 0.91
VPS72Q15906 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS72Q15906 RN7SL818P-201ENST00000485099 259 ntBASIC20.72■□□□□ 0.91
VPS72Q15906 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS72Q15906 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS72Q15906 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
VPS72Q15906 RN7SL725P-201ENST00000606439 259 ntBASIC20.72■□□□□ 0.91
VPS72Q15906 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VPS72Q15906 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VPS72Q15906 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.72■□□□□ 0.91
VPS72Q15906 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VPS72Q15906 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS72Q15906 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS72Q15906 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS72Q15906 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS72Q15906 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS72Q15906 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS72Q15906 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS72Q15906 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VPS72Q15906 ACTG1P2-201ENST00000415776 1125 ntBASIC20.71■□□□□ 0.91
VPS72Q15906 ACTG1P11-201ENST00000425411 1125 ntBASIC20.71■□□□□ 0.91
VPS72Q15906 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS72Q15906 POU5F1P6-201ENST00000466990 990 ntBASIC20.71■□□□□ 0.91
VPS72Q15906 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC20.71■□□□□ 0.91
VPS72Q15906 AC005730.2-201ENST00000564549 1184 ntBASIC20.71■□□□□ 0.91
VPS72Q15906 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VPS72Q15906 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VPS72Q15906 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC20.71■□□□□ 0.91
VPS72Q15906 AC100757.4-201ENST00000626934 759 ntBASIC20.71■□□□□ 0.91
VPS72Q15906 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
VPS72Q15906 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
VPS72Q15906 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.71■□□□□ 0.91
VPS72Q15906 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VPS72Q15906 REXO1L1P-202ENST00000608646 1974 ntBASIC20.7■□□□□ 0.9
VPS72Q15906 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms