Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.18□□□□□ -0.14
FOXF2Q12947 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.18□□□□□ -0.14
FOXF2Q12947 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
FOXF2Q12947 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
FOXF2Q12947 AC243562.2-201ENST00000561247 970 ntBASIC14.18□□□□□ -0.14
FOXF2Q12947 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.18□□□□□ -0.14
FOXF2Q12947 AC074044.1-201ENST00000609673 707 ntBASIC14.18□□□□□ -0.14
FOXF2Q12947 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXF2Q12947 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.18□□□□□ -0.14
FOXF2Q12947 AC007431.3-201ENST00000623221 587 ntBASIC14.18□□□□□ -0.14
FOXF2Q12947 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXF2Q12947 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXF2Q12947 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXF2Q12947 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXF2Q12947 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
FOXF2Q12947 AL391825.1-201ENST00000457671 1364 ntBASIC14.18□□□□□ -0.14
FOXF2Q12947 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXF2Q12947 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
FOXF2Q12947 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
FOXF2Q12947 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXF2Q12947 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXF2Q12947 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXF2Q12947 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXF2Q12947 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXF2Q12947 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXF2Q12947 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXF2Q12947 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXF2Q12947 AC138969.3-201ENST00000546612 1459 ntBASIC14.18□□□□□ -0.14
FOXF2Q12947 AC138932.2-201ENST00000548268 1459 ntBASIC14.18□□□□□ -0.14
FOXF2Q12947 AC126755.4-201ENST00000549796 1459 ntBASIC14.18□□□□□ -0.14
FOXF2Q12947 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
FOXF2Q12947 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FOXF2Q12947 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXF2Q12947 BNIP3P1-202ENST00000550043 1585 ntBASIC14.17□□□□□ -0.14
FOXF2Q12947 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 CU639417.3-201ENST00000624240 1404 ntBASIC14.17□□□□□ -0.14
FOXF2Q12947 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXF2Q12947 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXF2Q12947 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
FOXF2Q12947 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXF2Q12947 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 AC245100.5-201ENST00000452108 331 ntBASIC14.17□□□□□ -0.14
FOXF2Q12947 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXF2Q12947 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXF2Q12947 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.17□□□□□ -0.14
FOXF2Q12947 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXF2Q12947 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
FOXF2Q12947 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXF2Q12947 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXF2Q12947 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXF2Q12947 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXF2Q12947 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
FOXF2Q12947 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXF2Q12947 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.17□□□□□ -0.14
FOXF2Q12947 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF2Q12947 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
FOXF2Q12947 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXF2Q12947 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
FOXF2Q12947 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
FOXF2Q12947 KRT8P37-201ENST00000451609 1420 ntBASIC14.16□□□□□ -0.14
FOXF2Q12947 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXF2Q12947 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF2Q12947 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF2Q12947 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXF2Q12947 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF2Q12947 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FOXF2Q12947 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF2Q12947 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF2Q12947 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.16□□□□□ -0.14
FOXF2Q12947 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF2Q12947 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
FOXF2Q12947 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms