Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.46□□□□□ -0.1
H3F3AP84243 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.46□□□□□ -0.1
H3F3AP84243 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
H3F3AP84243 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
H3F3AP84243 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3F3AP84243 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3F3AP84243 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3F3AP84243 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3F3AP84243 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
H3F3AP84243 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.45□□□□□ -0.1
H3F3AP84243 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
H3F3AP84243 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
H3F3AP84243 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.45□□□□□ -0.1
H3F3AP84243 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.45□□□□□ -0.1
H3F3AP84243 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
H3F3AP84243 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H3F3AP84243 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H3F3AP84243 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
H3F3AP84243 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 AL353705.2-201ENST00000428243 662 ntBASIC14.45□□□□□ -0.1
H3F3AP84243 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.45□□□□□ -0.1
H3F3AP84243 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.45□□□□□ -0.1
H3F3AP84243 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.45□□□□□ -0.1
H3F3AP84243 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
H3F3AP84243 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.45□□□□□ -0.1
H3F3AP84243 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 AL691432.1-201ENST00000596308 1422 ntBASIC14.45□□□□□ -0.1
H3F3AP84243 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.45□□□□□ -0.1
H3F3AP84243 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.45□□□□□ -0.1
H3F3AP84243 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.45□□□□□ -0.1
H3F3AP84243 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
H3F3AP84243 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.45□□□□□ -0.1
H3F3AP84243 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
H3F3AP84243 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.44□□□□□ -0.1
H3F3AP84243 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
H3F3AP84243 AC069224.1-201ENST00000566372 1715 ntBASIC14.44□□□□□ -0.1
H3F3AP84243 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.44□□□□□ -0.1
H3F3AP84243 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
H3F3AP84243 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.44□□□□□ -0.1
H3F3AP84243 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.44□□□□□ -0.1
H3F3AP84243 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.44□□□□□ -0.1
H3F3AP84243 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.44□□□□□ -0.1
H3F3AP84243 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.44□□□□□ -0.1
H3F3AP84243 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 BANF1P1-201ENST00000553684 263 ntBASIC14.44□□□□□ -0.1
H3F3AP84243 AC025678.2-201ENST00000562061 970 ntBASIC14.44□□□□□ -0.1
H3F3AP84243 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.44□□□□□ -0.1
H3F3AP84243 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.44□□□□□ -0.1
H3F3AP84243 AC026979.3-201ENST00000607315 403 ntBASIC14.44□□□□□ -0.1
H3F3AP84243 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.44□□□□□ -0.1
H3F3AP84243 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
H3F3AP84243 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
H3F3AP84243 AC024909.3-201ENST00000611513 2257 ntBASIC14.44□□□□□ -0.1
H3F3AP84243 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
H3F3AP84243 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
H3F3AP84243 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.44□□□□□ -0.1
H3F3AP84243 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H3F3AP84243 AP001282.1-201ENST00000531301 1499 ntBASIC14.44□□□□□ -0.1
H3F3AP84243 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms