Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA4P78363 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ABCA4P78363 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCA4P78363 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA4P78363 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ABCA4P78363 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ABCA4P78363 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCA4P78363 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCA4P78363 BNIP3P42-201ENST00000454982 569 ntBASIC13.88□□□□□ -0.19
ABCA4P78363 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ABCA4P78363 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.88□□□□□ -0.19
ABCA4P78363 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.88□□□□□ -0.19
ABCA4P78363 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA4P78363 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.88□□□□□ -0.19
ABCA4P78363 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.88□□□□□ -0.19
ABCA4P78363 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.88□□□□□ -0.19
ABCA4P78363 BNIP3P29-201ENST00000598302 571 ntBASIC13.88□□□□□ -0.19
ABCA4P78363 AC011447.5-201ENST00000616168 564 ntBASIC13.88□□□□□ -0.19
ABCA4P78363 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA4P78363 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA4P78363 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ABCA4P78363 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA4P78363 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ABCA4P78363 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA4P78363 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
ABCA4P78363 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ABCA4P78363 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ABCA4P78363 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ABCA4P78363 CDC14C-201ENST00000428251 1719 ntBASIC13.87□□□□□ -0.19
ABCA4P78363 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
ABCA4P78363 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCA4P78363 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCA4P78363 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
ABCA4P78363 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCA4P78363 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.87□□□□□ -0.19
ABCA4P78363 AL391069.4-201ENST00000609583 481 ntBASIC13.87□□□□□ -0.19
ABCA4P78363 AC020765.3-201ENST00000613051 740 ntBASIC13.87□□□□□ -0.19
ABCA4P78363 MIR6869-201ENST00000619434 62 ntBASIC13.87□□□□□ -0.19
ABCA4P78363 AC068587.10-201ENST00000641210 219 ntBASIC13.87□□□□□ -0.19
ABCA4P78363 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCA4P78363 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.87□□□□□ -0.19
ABCA4P78363 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
ABCA4P78363 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCA4P78363 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 AC005622.1-201ENST00000636801 1703 ntBASIC13.87□□□□□ -0.19
ABCA4P78363 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ABCA4P78363 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.87□□□□□ -0.19
ABCA4P78363 RPL7P3-201ENST00000441388 714 ntBASIC13.87□□□□□ -0.19
ABCA4P78363 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ABCA4P78363 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.87□□□□□ -0.19
ABCA4P78363 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 RARRES2P5-201ENST00000564013 466 ntBASIC13.87□□□□□ -0.19
ABCA4P78363 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.87□□□□□ -0.19
ABCA4P78363 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.87□□□□□ -0.19
ABCA4P78363 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.87□□□□□ -0.19
ABCA4P78363 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
ABCA4P78363 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ABCA4P78363 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ABCA4P78363 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCA4P78363 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCA4P78363 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ABCA4P78363 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ABCA4P78363 AC005052.1-201ENST00000625181 2492 ntBASIC13.86□□□□□ -0.19
ABCA4P78363 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.86□□□□□ -0.19
ABCA4P78363 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCA4P78363 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCA4P78363 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.86□□□□□ -0.19
ABCA4P78363 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.86□□□□□ -0.19
ABCA4P78363 PKD1P1-201ENST00000458669 6805 ntBASIC13.86□□□□□ -0.19
ABCA4P78363 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ABCA4P78363 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ABCA4P78363 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCA4P78363 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.86□□□□□ -0.19
ABCA4P78363 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ABCA4P78363 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ABCA4P78363 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.86□□□□□ -0.19
ABCA4P78363 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.86□□□□□ -0.19
ABCA4P78363 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ABCA4P78363 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ABCA4P78363 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms