Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.21□□□□□ -0.13
DEFA3P59666 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.21□□□□□ -0.13
DEFA3P59666 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
DEFA3P59666 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.21□□□□□ -0.13
DEFA3P59666 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.21□□□□□ -0.13
DEFA3P59666 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
DEFA3P59666 AL355802.2-201ENST00000402069 882 ntBASIC14.21□□□□□ -0.13
DEFA3P59666 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.21□□□□□ -0.13
DEFA3P59666 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.21□□□□□ -0.13
DEFA3P59666 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.21□□□□□ -0.13
DEFA3P59666 AC112693.3-201ENST00000624819 1983 ntBASIC14.21□□□□□ -0.13
DEFA3P59666 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
DEFA3P59666 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
DEFA3P59666 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA3P59666 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA3P59666 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA3P59666 AL049757.1-201ENST00000616842 1596 ntBASIC14.21□□□□□ -0.14
DEFA3P59666 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA3P59666 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.21□□□□□ -0.14
DEFA3P59666 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.21□□□□□ -0.14
DEFA3P59666 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA3P59666 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
DEFA3P59666 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
DEFA3P59666 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.2□□□□□ -0.14
DEFA3P59666 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
DEFA3P59666 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.2□□□□□ -0.14
DEFA3P59666 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.2□□□□□ -0.14
DEFA3P59666 NUDT16P1-203ENST00000513809 620 ntBASIC14.2□□□□□ -0.14
DEFA3P59666 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.2□□□□□ -0.14
DEFA3P59666 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.2□□□□□ -0.14
DEFA3P59666 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.2□□□□□ -0.14
DEFA3P59666 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.2□□□□□ -0.14
DEFA3P59666 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.2□□□□□ -0.14
DEFA3P59666 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.2□□□□□ -0.14
DEFA3P59666 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.2□□□□□ -0.14
DEFA3P59666 MIR6821-201ENST00000617625 74 ntBASIC14.2□□□□□ -0.14
DEFA3P59666 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.2□□□□□ -0.14
DEFA3P59666 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.2□□□□□ -0.14
DEFA3P59666 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
DEFA3P59666 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.2□□□□□ -0.14
DEFA3P59666 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.2□□□□□ -0.14
DEFA3P59666 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
DEFA3P59666 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
DEFA3P59666 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
DEFA3P59666 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.19□□□□□ -0.14
DEFA3P59666 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DEFA3P59666 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
DEFA3P59666 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
DEFA3P59666 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms