Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.17■□□□□ 0.02
RAB38P57729 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAB38P57729 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
RAB38P57729 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB38P57729 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAB38P57729 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB38P57729 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB38P57729 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB38P57729 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB38P57729 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 LINC02447-202ENST00000501888 2146 ntBASIC15.16■□□□□ 0.02
RAB38P57729 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB38P57729 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB38P57729 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAB38P57729 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.16■□□□□ 0.02
RAB38P57729 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB38P57729 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RAB38P57729 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RAB38P57729 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RAB38P57729 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RAB38P57729 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.16■□□□□ 0.02
RAB38P57729 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB38P57729 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 AL079307.3-201ENST00000556114 283 ntBASIC15.16■□□□□ 0.02
RAB38P57729 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.16■□□□□ 0.02
RAB38P57729 AC106028.4-201ENST00000614509 607 ntBASIC15.16■□□□□ 0.02
RAB38P57729 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB38P57729 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAB38P57729 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RAB38P57729 AC073592.8-201ENST00000624126 511 ntBASIC15.16■□□□□ 0.02
RAB38P57729 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RAB38P57729 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB38P57729 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 AC134407.2-201ENST00000625089 1978 ntBASIC15.16■□□□□ 0.02
RAB38P57729 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.16■□□□□ 0.02
RAB38P57729 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RAB38P57729 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.16■□□□□ 0.02
RAB38P57729 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAB38P57729 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB38P57729 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB38P57729 BNIP3P1-202ENST00000550043 1585 ntBASIC15.15■□□□□ 0.02
RAB38P57729 AC024909.3-201ENST00000611513 2257 ntBASIC15.15■□□□□ 0.02
RAB38P57729 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB38P57729 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RAB38P57729 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.15■□□□□ 0.02
RAB38P57729 SPDYE17-201ENST00000412399 783 ntBASIC15.15■□□□□ 0.02
RAB38P57729 HLA-V-204ENST00000476601 1289 ntBASIC15.15■□□□□ 0.02
RAB38P57729 RFPL4AP1-201ENST00000530883 850 ntBASIC15.15■□□□□ 0.02
RAB38P57729 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB38P57729 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB38P57729 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB38P57729 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB38P57729 AL158211.3-201ENST00000607385 239 ntBASIC15.15■□□□□ 0.02
RAB38P57729 SPDYE12P-201ENST00000618416 771 ntBASIC15.15■□□□□ 0.02
RAB38P57729 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB38P57729 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB38P57729 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB38P57729 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.15■□□□□ 0.02
RAB38P57729 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB38P57729 TNRC18P3-201ENST00000441896 2691 ntBASIC15.15■□□□□ 0.02
RAB38P57729 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB38P57729 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RAB38P57729 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RAB38P57729 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB38P57729 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB38P57729 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB38P57729 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB38P57729 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB38P57729 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB38P57729 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB38P57729 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB38P57729 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB38P57729 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB38P57729 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB38P57729 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB38P57729 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB38P57729 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB38P57729 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB38P57729 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB38P57729 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB38P57729 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAB38P57729 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB38P57729 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms