Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
PDE1AP54750 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 AC254562.1-201ENST00000417586 456 ntBASIC19.68■□□□□ 0.74
PDE1AP54750 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.68■□□□□ 0.74
PDE1AP54750 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 RBPMS2P1-201ENST00000437762 623 ntBASIC19.68■□□□□ 0.74
PDE1AP54750 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.68■□□□□ 0.74
PDE1AP54750 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.68■□□□□ 0.74
PDE1AP54750 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.68■□□□□ 0.74
PDE1AP54750 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PDE1AP54750 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
PDE1AP54750 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.68■□□□□ 0.74
PDE1AP54750 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.68■□□□□ 0.74
PDE1AP54750 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.68■□□□□ 0.74
PDE1AP54750 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PDE1AP54750 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
PDE1AP54750 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.68■□□□□ 0.74
PDE1AP54750 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.68■□□□□ 0.74
PDE1AP54750 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDE1AP54750 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
PDE1AP54750 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.68■□□□□ 0.74
PDE1AP54750 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PDE1AP54750 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE1AP54750 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.67■□□□□ 0.74
PDE1AP54750 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE1AP54750 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE1AP54750 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PDE1AP54750 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE1AP54750 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PDE1AP54750 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.67■□□□□ 0.74
PDE1AP54750 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDE1AP54750 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.67■□□□□ 0.74
PDE1AP54750 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.67■□□□□ 0.74
PDE1AP54750 AL139010.1-201ENST00000454878 894 ntBASIC19.67■□□□□ 0.74
PDE1AP54750 AC023141.5-201ENST00000458585 616 ntBASIC19.67■□□□□ 0.74
PDE1AP54750 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.67■□□□□ 0.74
PDE1AP54750 AC026150.2-201ENST00000564693 1156 ntBASIC19.67■□□□□ 0.74
PDE1AP54750 AC027612.4-201ENST00000605371 583 ntBASIC19.67■□□□□ 0.74
PDE1AP54750 AC018529.1-201ENST00000613063 361 ntBASIC19.67■□□□□ 0.74
PDE1AP54750 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
PDE1AP54750 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.67■□□□□ 0.74
PDE1AP54750 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE1AP54750 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE1AP54750 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.67■□□□□ 0.74
PDE1AP54750 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.67■□□□□ 0.74
PDE1AP54750 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE1AP54750 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE1AP54750 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDE1AP54750 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDE1AP54750 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
PDE1AP54750 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 REXO1L1P-202ENST00000608646 1974 ntBASIC19.66■□□□□ 0.74
PDE1AP54750 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.66■□□□□ 0.74
PDE1AP54750 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.66■□□□□ 0.74
PDE1AP54750 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.66■□□□□ 0.74
PDE1AP54750 EEF1DP4-201ENST00000446006 880 ntBASIC19.66■□□□□ 0.74
PDE1AP54750 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.66■□□□□ 0.74
PDE1AP54750 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.66■□□□□ 0.74
PDE1AP54750 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.66■□□□□ 0.74
PDE1AP54750 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PDE1AP54750 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.66■□□□□ 0.74
PDE1AP54750 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PDE1AP54750 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PDE1AP54750 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.66■□□□□ 0.74
PDE1AP54750 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PDE1AP54750 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDE1AP54750 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PDE1AP54750 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDE1AP54750 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.65■□□□□ 0.74
PDE1AP54750 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
PDE1AP54750 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
PDE1AP54750 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms