Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 HAUS4P1-201ENST00000406739 1145 ntBASIC17.66■□□□□ 0.42
CLCN3P51790 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 AC055876.2-201ENST00000531834 546 ntBASIC17.66■□□□□ 0.42
CLCN3P51790 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.66■□□□□ 0.42
CLCN3P51790 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
CLCN3P51790 LINC01115-203ENST00000606068 577 ntBASIC17.66■□□□□ 0.42
CLCN3P51790 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCN3P51790 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CLCN3P51790 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CLCN3P51790 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLCN3P51790 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCN3P51790 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CLCN3P51790 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN3P51790 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCN3P51790 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN3P51790 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 AC087499.6-201ENST00000411576 835 ntBASIC17.65■□□□□ 0.42
CLCN3P51790 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCN3P51790 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN3P51790 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.65■□□□□ 0.42
CLCN3P51790 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.65■□□□□ 0.42
CLCN3P51790 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.65■□□□□ 0.42
CLCN3P51790 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCN3P51790 AC092337.1-201ENST00000568699 1129 ntBASIC17.65■□□□□ 0.42
CLCN3P51790 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN3P51790 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCN3P51790 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCN3P51790 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
CLCN3P51790 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLCN3P51790 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLCN3P51790 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN3P51790 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLCN3P51790 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLCN3P51790 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCN3P51790 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 AL391825.1-201ENST00000457671 1364 ntBASIC17.65■□□□□ 0.42
CLCN3P51790 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN3P51790 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CLCN3P51790 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CLCN3P51790 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLCN3P51790 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
CLCN3P51790 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CLCN3P51790 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.64■□□□□ 0.42
CLCN3P51790 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLCN3P51790 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CLCN3P51790 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN3P51790 PCDH8P1-201ENST00000428983 2773 ntBASIC17.64■□□□□ 0.41
CLCN3P51790 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CLCN3P51790 AC138969.3-201ENST00000546612 1459 ntBASIC17.64■□□□□ 0.41
CLCN3P51790 AC138932.2-201ENST00000548268 1459 ntBASIC17.64■□□□□ 0.41
CLCN3P51790 AC126755.4-201ENST00000549796 1459 ntBASIC17.64■□□□□ 0.41
CLCN3P51790 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCN3P51790 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.64■□□□□ 0.41
CLCN3P51790 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN3P51790 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLCN3P51790 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLCN3P51790 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN3P51790 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLCN3P51790 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLCN3P51790 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN3P51790 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLCN3P51790 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.64■□□□□ 0.41
CLCN3P51790 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCN3P51790 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCN3P51790 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
CLCN3P51790 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCN3P51790 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.64■□□□□ 0.41
CLCN3P51790 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.64■□□□□ 0.41
CLCN3P51790 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.64■□□□□ 0.41
CLCN3P51790 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCN3P51790 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.64■□□□□ 0.41
CLCN3P51790 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCN3P51790 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCN3P51790 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCN3P51790 Z97205.2-201ENST00000564697 1639 ntBASIC17.64■□□□□ 0.41
CLCN3P51790 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.64■□□□□ 0.41
CLCN3P51790 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms