Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC134915.1-201ENST00000426461 574 ntBASIC17.75■□□□□ 0.43
CPT1AP50416 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CPT1AP50416 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.75■□□□□ 0.43
CPT1AP50416 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.75■□□□□ 0.43
CPT1AP50416 SLED1-202ENST00000512051 380 ntBASIC17.75■□□□□ 0.43
CPT1AP50416 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.75■□□□□ 0.43
CPT1AP50416 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CPT1AP50416 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CPT1AP50416 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPT1AP50416 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CPT1AP50416 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.75■□□□□ 0.43
CPT1AP50416 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.74■□□□□ 0.43
CPT1AP50416 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 INTS4P2-202ENST00000614726 2019 ntBASIC17.74■□□□□ 0.43
CPT1AP50416 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CPT1AP50416 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.74■□□□□ 0.43
CPT1AP50416 SOCS2P1-201ENST00000417727 557 ntBASIC17.74■□□□□ 0.43
CPT1AP50416 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.74■□□□□ 0.43
CPT1AP50416 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.74■□□□□ 0.43
CPT1AP50416 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.74■□□□□ 0.43
CPT1AP50416 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.74■□□□□ 0.43
CPT1AP50416 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.74■□□□□ 0.43
CPT1AP50416 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.74■□□□□ 0.43
CPT1AP50416 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.74■□□□□ 0.43
CPT1AP50416 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.74■□□□□ 0.43
CPT1AP50416 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.74■□□□□ 0.43
CPT1AP50416 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.74■□□□□ 0.43
CPT1AP50416 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.74■□□□□ 0.43
CPT1AP50416 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPT1AP50416 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.74■□□□□ 0.43
CPT1AP50416 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CPT1AP50416 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPT1AP50416 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.73■□□□□ 0.43
CPT1AP50416 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPT1AP50416 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.73■□□□□ 0.43
CPT1AP50416 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CPT1AP50416 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
CPT1AP50416 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.73■□□□□ 0.43
CPT1AP50416 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPT1AP50416 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPT1AP50416 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.73■□□□□ 0.43
CPT1AP50416 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CPT1AP50416 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPT1AP50416 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.73■□□□□ 0.43
CPT1AP50416 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CPT1AP50416 HAUS4P1-201ENST00000406739 1145 ntBASIC17.73■□□□□ 0.43
CPT1AP50416 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.73■□□□□ 0.43
CPT1AP50416 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.73■□□□□ 0.43
CPT1AP50416 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.73■□□□□ 0.43
CPT1AP50416 KLF2P4-201ENST00000451959 1225 ntBASIC17.73■□□□□ 0.43
CPT1AP50416 BNIP3P42-201ENST00000454982 569 ntBASIC17.73■□□□□ 0.43
CPT1AP50416 CTBP2P5-201ENST00000454986 1264 ntBASIC17.73■□□□□ 0.43
CPT1AP50416 PHKG1P2-201ENST00000457537 863 ntBASIC17.73■□□□□ 0.43
CPT1AP50416 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.73■□□□□ 0.43
CPT1AP50416 PTP4A1P2-201ENST00000546033 454 ntBASIC17.73■□□□□ 0.43
CPT1AP50416 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.73■□□□□ 0.43
CPT1AP50416 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.73■□□□□ 0.43
CPT1AP50416 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.73■□□□□ 0.43
CPT1AP50416 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
CPT1AP50416 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.73■□□□□ 0.43
CPT1AP50416 BNIP3P29-201ENST00000598302 571 ntBASIC17.73■□□□□ 0.43
CPT1AP50416 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.73■□□□□ 0.43
CPT1AP50416 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.73■□□□□ 0.43
CPT1AP50416 AC011447.5-201ENST00000616168 564 ntBASIC17.73■□□□□ 0.43
CPT1AP50416 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.73■□□□□ 0.43
CPT1AP50416 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.73■□□□□ 0.43
CPT1AP50416 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.73■□□□□ 0.43
CPT1AP50416 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.73■□□□□ 0.43
CPT1AP50416 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPT1AP50416 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPT1AP50416 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPT1AP50416 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CPT1AP50416 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CPT1AP50416 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CPT1AP50416 PDIA3P1-201ENST00000471856 1510 ntBASIC17.72■□□□□ 0.43
CPT1AP50416 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPT1AP50416 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms