Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 HMGN1P19-201ENST00000436976 333 ntBASIC18.95■□□□□ 0.62
NEDD4P46934 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.95■□□□□ 0.62
NEDD4P46934 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.95■□□□□ 0.62
NEDD4P46934 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.95■□□□□ 0.62
NEDD4P46934 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.95■□□□□ 0.62
NEDD4P46934 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.95■□□□□ 0.62
NEDD4P46934 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.95■□□□□ 0.62
NEDD4P46934 AL590560.3-201ENST00000623350 461 ntBASIC18.95■□□□□ 0.62
NEDD4P46934 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.95■□□□□ 0.62
NEDD4P46934 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.95■□□□□ 0.62
NEDD4P46934 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.95■□□□□ 0.62
NEDD4P46934 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NEDD4P46934 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.95■□□□□ 0.62
NEDD4P46934 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEDD4P46934 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NEDD4P46934 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.94■□□□□ 0.62
NEDD4P46934 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NEDD4P46934 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NEDD4P46934 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
NEDD4P46934 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.94■□□□□ 0.62
NEDD4P46934 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NEDD4P46934 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 KRT8P37-201ENST00000451609 1420 ntBASIC18.94■□□□□ 0.62
NEDD4P46934 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.94■□□□□ 0.62
NEDD4P46934 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NEDD4P46934 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.94■□□□□ 0.62
NEDD4P46934 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
NEDD4P46934 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 MIR770-201ENST00000390219 98 ntBASIC18.94■□□□□ 0.62
NEDD4P46934 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.94■□□□□ 0.62
NEDD4P46934 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.94■□□□□ 0.62
NEDD4P46934 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.94■□□□□ 0.62
NEDD4P46934 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.94■□□□□ 0.62
NEDD4P46934 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.94■□□□□ 0.62
NEDD4P46934 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NEDD4P46934 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NEDD4P46934 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.93■□□□□ 0.62
NEDD4P46934 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.93■□□□□ 0.62
NEDD4P46934 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NEDD4P46934 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
NEDD4P46934 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NEDD4P46934 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 REXO1L1P-202ENST00000608646 1974 ntBASIC18.93■□□□□ 0.62
NEDD4P46934 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.93■□□□□ 0.62
NEDD4P46934 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.93■□□□□ 0.62
NEDD4P46934 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.93■□□□□ 0.62
NEDD4P46934 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.93■□□□□ 0.62
NEDD4P46934 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.93■□□□□ 0.62
NEDD4P46934 AC010336.2-201ENST00000564226 506 ntBASIC18.93■□□□□ 0.62
NEDD4P46934 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.93■□□□□ 0.62
NEDD4P46934 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
NEDD4P46934 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NEDD4P46934 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
NEDD4P46934 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.93■□□□□ 0.62
NEDD4P46934 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEDD4P46934 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.92■□□□□ 0.62
NEDD4P46934 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 PKD1P1-201ENST00000458669 6805 ntBASIC18.92■□□□□ 0.62
NEDD4P46934 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.92■□□□□ 0.62
NEDD4P46934 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.92■□□□□ 0.62
NEDD4P46934 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.92■□□□□ 0.62
NEDD4P46934 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.92■□□□□ 0.62
NEDD4P46934 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEDD4P46934 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.92■□□□□ 0.62
NEDD4P46934 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms