Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLC1A1P43005 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC1A1P43005 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A1P43005 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A1P43005 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A1P43005 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SLC1A1P43005 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC1A1P43005 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SLC1A1P43005 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SLC1A1P43005 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC1A1P43005 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
SLC1A1P43005 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC1A1P43005 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.91■□□□□ 0.3
SLC1A1P43005 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.91■□□□□ 0.3
SLC1A1P43005 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC1A1P43005 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SLC1A1P43005 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC1A1P43005 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SLC1A1P43005 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.91■□□□□ 0.3
SLC1A1P43005 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SLC1A1P43005 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC1A1P43005 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SLC1A1P43005 AC134407.2-201ENST00000625089 1978 ntBASIC16.91■□□□□ 0.3
SLC1A1P43005 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 HYMAI-201ENST00000635591 3347 ntBASIC16.91■□□□□ 0.3
SLC1A1P43005 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SLC1A1P43005 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A1P43005 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC1A1P43005 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SLC1A1P43005 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC1A1P43005 AC073347.1-201ENST00000421633 2643 ntBASIC16.9■□□□□ 0.3
SLC1A1P43005 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC1A1P43005 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SLC1A1P43005 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
SLC1A1P43005 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 AL590627.1-203ENST00000421194 1026 ntBASIC16.9■□□□□ 0.3
SLC1A1P43005 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.9■□□□□ 0.3
SLC1A1P43005 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC1A1P43005 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC1A1P43005 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.9■□□□□ 0.3
SLC1A1P43005 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC1A1P43005 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.9■□□□□ 0.3
SLC1A1P43005 AC243562.2-201ENST00000561247 970 ntBASIC16.9■□□□□ 0.3
SLC1A1P43005 AL138918.1-201ENST00000568306 659 ntBASIC16.9■□□□□ 0.3
SLC1A1P43005 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.9■□□□□ 0.3
SLC1A1P43005 AC061975.2-201ENST00000581722 295 ntBASIC16.9■□□□□ 0.3
SLC1A1P43005 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC1A1P43005 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC1A1P43005 AC027601.4-201ENST00000611259 610 ntBASIC16.9■□□□□ 0.3
SLC1A1P43005 BX640515.1-201ENST00000617215 977 ntBASIC16.9■□□□□ 0.3
SLC1A1P43005 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC1A1P43005 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SLC1A1P43005 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC1A1P43005 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC1A1P43005 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC1A1P43005 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SLC1A1P43005 SSR4P1-203ENST00000599569 2260 ntBASIC16.9■□□□□ 0.3
SLC1A1P43005 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SLC1A1P43005 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC1A1P43005 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 TMBIM7P-203ENST00000641617 1718 ntBASIC16.9■□□□□ 0.3
SLC1A1P43005 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC1A1P43005 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SLC1A1P43005 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
SLC1A1P43005 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
SLC1A1P43005 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC1A1P43005 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC1A1P43005 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC1A1P43005 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC1A1P43005 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
SLC1A1P43005 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC1A1P43005 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms