Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CKS2P33552 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CKS2P33552 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CKS2P33552 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 AC139749.1-202ENST00000617529 3139 ntBASIC11.95□□□□□ -0.5
CKS2P33552 AC007686.3-201ENST00000619017 3487 ntBASIC11.95□□□□□ -0.5
CKS2P33552 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 LINC00982-205ENST00000420957 435 ntBASIC11.95□□□□□ -0.5
CKS2P33552 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 SLC25A3P1-201ENST00000443844 931 ntBASIC11.95□□□□□ -0.5
CKS2P33552 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.95□□□□□ -0.5
CKS2P33552 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.95□□□□□ -0.5
CKS2P33552 AC008550.1-201ENST00000511500 884 ntBASIC11.95□□□□□ -0.5
CKS2P33552 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.95□□□□□ -0.5
CKS2P33552 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.95□□□□□ -0.5
CKS2P33552 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.95□□□□□ -0.5
CKS2P33552 AL592071.1-201ENST00000611956 408 ntBASIC11.95□□□□□ -0.5
CKS2P33552 AC010654.1-201ENST00000615722 808 ntBASIC11.95□□□□□ -0.5
CKS2P33552 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CKS2P33552 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CKS2P33552 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.95□□□□□ -0.5
CKS2P33552 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CKS2P33552 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.95□□□□□ -0.5
CKS2P33552 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 AC005089.1-201ENST00000619486 2241 ntBASIC11.95□□□□□ -0.5
CKS2P33552 LINC01101-201ENST00000622953 1884 ntBASIC11.95□□□□□ -0.5
CKS2P33552 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC11.95□□□□□ -0.5
CKS2P33552 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CKS2P33552 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 TCAF2P1-201ENST00000291129 2421 ntBASIC11.95□□□□□ -0.5
CKS2P33552 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.95□□□□□ -0.5
CKS2P33552 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CKS2P33552 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.95□□□□□ -0.5
CKS2P33552 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
CKS2P33552 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.94□□□□□ -0.5
CKS2P33552 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.94□□□□□ -0.5
CKS2P33552 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
CKS2P33552 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CKS2P33552 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CKS2P33552 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CKS2P33552 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.94□□□□□ -0.5
CKS2P33552 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.94□□□□□ -0.5
CKS2P33552 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.94□□□□□ -0.5
CKS2P33552 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CKS2P33552 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 AC026396.1-201ENST00000419388 421 ntBASIC11.94□□□□□ -0.5
CKS2P33552 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.94□□□□□ -0.5
CKS2P33552 RN7SL606P-201ENST00000472779 293 ntBASIC11.94□□□□□ -0.5
CKS2P33552 S100A2-206ENST00000497140 697 ntTSL 2 BASIC11.94□□□□□ -0.5
CKS2P33552 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC11.94□□□□□ -0.5
CKS2P33552 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CKS2P33552 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CKS2P33552 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms